Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40150
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         25   0.71 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 660 PRFEISKLMGLHGESGWKAKGKAGDKS*TGRRGYELPRSRR 782
           PR + S+  G H +S  K + K G +  T R  Y  PR+ R
Sbjct: 200 PR-QYSQSRGRHNQSRSKRQPKTGREDQTRRNPYYRPRTSR 239


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 175 SFRSNFRSLGTVDKRGADLPLAEHRRSLDIVP-IFASEWVDNLLLNTFFTAL 23
           S  S+  SL  + K  A LP+ +H R   +VP ++ + +   L L +F  ++
Sbjct: 2   SLYSSINSLVLISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGSFIVSV 53


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 335 GWLKNGRLSS 364
           GWLK G+LSS
Sbjct: 124 GWLKKGKLSS 133


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 445 SRSPYW*NQCRRHVERIHRLSSHQC 371
           +  P+  ++CR    R H L  H+C
Sbjct: 243 NEKPFECDKCRGRFRRRHHLVHHKC 267


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +1

Query: 685  WDFTAKAVGRQRGKPETSLKRAGGAMSFPVQGE 783
            W +  K VGR++   +  L + GG   +    E
Sbjct: 1249 WKYKVKCVGRKQLAQKYQLPKMGGPQPYSACSE 1281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,701
Number of Sequences: 336
Number of extensions: 4322
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)