Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40150
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   105   4e-23
U80030-12|AAG24159.1|  391|Caenorhabditis elegans Hypothetical p...    28   6.8  
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   9.0  
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.      28   9.0  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  105 bits (252), Expect = 4e-23
 Identities = 49/66 (74%), Positives = 57/66 (86%)
 Frame = +2

Query: 56  VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 235
           VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL    ++E
Sbjct: 20  VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSE 76

Query: 236 RSFRKF 253
             FRKF
Sbjct: 77  ADFRKF 82



 Score =  104 bits (250), Expect = 7e-23
 Identities = 51/88 (57%), Positives = 62/88 (70%)
 Frame = +1

Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 420
           F + +LIAE VQG+NVL NFH M +T DKL  +VKKW TLIEAN  VKTTDGY LRVF I
Sbjct: 79  FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVI 138

Query: 421 GFTNKDSLSQRKTCYAQHTQVRAIRKKM 504
            FT K     +KT Y + +++R IR +M
Sbjct: 139 AFTKKSVNQVKKTSYTKTSKIRKIRSEM 166



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 30/71 (42%), Positives = 43/71 (60%)
 Frame = +3

Query: 492 QKENV*IITRDVTNSELREVVNKLIPDSIAKDIEKACHGITLCAMFASEK*KC*KSPRFE 671
           + E +  I ++VT  +L+EVV+KLIPDSI KDIEK C  +         K K  K P+ +
Sbjct: 163 RSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVD 222

Query: 672 ISKLMGLHGES 704
           + +L  LHG+S
Sbjct: 223 LGRLHDLHGDS 233


>U80030-12|AAG24159.1|  391|Caenorhabditis elegans Hypothetical
           protein K12D9.1 protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 617 EGNAMAGLLDVLGNGVRNQLVHHLPEFRVSDVACNDSHIFFLIA 486
           E + ++GL+   GNG++ +L      FRV DV C +     L+A
Sbjct: 180 EQHMISGLIPAFGNGIKEKLED--GGFRVLDVGCGEGFHSCLLA 221


>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
            C02B4.1 protein.
          Length = 1461

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 418  IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW*T 558
            IGF  ++ L   + C   + Q R   ++ C S  + S+    G W T
Sbjct: 868  IGFQIRERLCDGELCATANKQARTCNQQQCPSAFSLSVWSEWGEWTT 914


>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
            C02B4.1 protein.
          Length = 1461

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 418  IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW*T 558
            IGF  ++ L   + C   + Q R   ++ C S  + S+    G W T
Sbjct: 868  IGFQIRERLCDGELCATANKQARTCNQQQCPSAFSLSVWSEWGEWTT 914


>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
          Length = 1461

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 418  IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW*T 558
            IGF  ++ L   + C   + Q R   ++ C S  + S+    G W T
Sbjct: 868  IGFQIRERLCDGELCATANKQARTCNQQQCPSAFSLSVWSEWGEWTT 914


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,126,493
Number of Sequences: 27780
Number of extensions: 428359
Number of successful extensions: 1184
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)