Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40149
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   7.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   7.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   7.1  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +2

Query: 389 ICSEAKWTTLTSALRRMPLISSTVGR 466
           +  ++KW   ++ +  MPL++  +GR
Sbjct: 413 LAEDSKWRVRSAIIEYMPLLAGQLGR 438


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 410 TTLTSALRRMPLISSTVGRTNRL 478
           TT +SAL   PLI   +  +N L
Sbjct: 15  TTTSSALNSTPLIEFNISTSNYL 37


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 410 TTLTSALRRMPLISSTVGRTNRL 478
           TT +SAL   PLI   +  +N L
Sbjct: 15  TTTSSALNSTPLIEFNISTSNYL 37


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +2

Query: 68  RTRLGDAIDKTSLKILKESYNLADDKNVIASPLGVMLLLSLYESGAG 208
           +  L  A+D     +L   +NL   K+ IA P    ++L L  +  G
Sbjct: 619 KINLKHALDLDRQGLLHRQFNLPPAKDTIAVPNNGYVVLRLRANNPG 665


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,430
Number of Sequences: 336
Number of extensions: 5069
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)