Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40149
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 35 0.084
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 35 0.084
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 31 0.79
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 31 0.79
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 30 1.8
U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 30 1.8
U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical pr... 29 3.2
U29536-5|AAA68794.1| 246|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 28 7.3
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 28 7.3
Z82256-1|CAB05113.1| 627|Caenorhabditis elegans Hypothetical pr... 28 9.7
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 34.7 bits (76), Expect = 0.084
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 113 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEV 256
LK L +V+ SPL + L L+L +GA +++E+ ++LGG +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRI 60
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 34.7 bits (76), Expect = 0.084
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 113 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEV 256
LK L +V+ SPL + L L+L +GA +++E+ ++LGG +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRI 60
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 140 DKNVIASPLGVMLLLSLYESGAGAQSKEEIRE-ILGGGEVKSHHTHTDY*ISVTQNSTR 313
+++++ SPL + L+LSL +G S+++IR +L G + H + +N T+
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTK 79
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 140 DKNVIASPLGVMLLLSLYESGAGAQSKEEIRE-ILGGGEVKSHHTHTDY*ISVTQNSTR 313
+++++ SPL + L+LSL +G S+++IR +L G + H + +N T+
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTK 79
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 319 LTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGH 486
+ VAN I+ + + + + L+ + +NF + +A+ IN + E T+GH
Sbjct: 93 VNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +2
Query: 104 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG----EVKSHHT 271
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E++ H +
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 272 HTDY*ISVTQNST 310
+ + V + T
Sbjct: 79 NISAGLLVAEKGT 91
>U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical
protein B0412.3 protein.
Length = 1107
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 VQGRDKGNPWGRG--GQESSHTYGLLNQRYAEFHPKFLTVANKI 339
+ G+ G+P+ QE HTY L Q + HP F+ A+KI
Sbjct: 550 LDGKPPGSPFPNDDISQEQLHTYQLQWQHVLQEHPAFVVQASKI 593
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 319 LTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGH 486
+ VAN I+ + + + + L+ + +NF + +A+ IN + E T+GH
Sbjct: 93 VNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +2
Query: 104 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG----EVKSHHT 271
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E++ H +
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 272 HTDY*ISVTQNST 310
+ + V + T
Sbjct: 79 NISAGLLVAEKGT 91
>U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical
protein R08E3.4a protein.
Length = 447
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 471 TDSRTQXDSCERSKIDPATAVANPNVIFFQGHWHVSFNAS*TEGKRFPRPM 623
TD+ S E KI P+ +ANP+++ + FN G+ PRPM
Sbjct: 296 TDTSDNSTSSEFDKIPPSFPMANPDILLMCLNQMNQFNGF---GENIPRPM 343
>U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical
protein R08E3.4b protein.
Length = 480
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 471 TDSRTQXDSCERSKIDPATAVANPNVIFFQGHWHVSFNAS*TEGKRFPRPM 623
TD+ S E KI P+ +ANP+++ + FN G+ PRPM
Sbjct: 296 TDTSDNSTSSEFDKIPPSFPMANPDILLMCLNQMNQFNGF---GENIPRPM 343
>U29536-5|AAA68794.1| 246|Caenorhabditis elegans Hypothetical
protein F45E12.1 protein.
Length = 246
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -2
Query: 233 PLSLPWTVHRLQTRTRKAAASRLEETLSHS 144
P+S P T HRL T RK L+ETL HS
Sbjct: 43 PMS-PLTTHRLLTVKRKILVLDLDETLIHS 71
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 700 GAKVVRVYPYKGGQDSRIGPGFCPGQN-FTGLPAILGE 810
GA + YP GQD GP PG++ G P + GE
Sbjct: 671 GAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGE 708
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 700 GAKVVRVYPYKGGQDSRIGPGFCPGQN-FTGLPAILGE 810
GA + YP GQD GP PG++ G P + GE
Sbjct: 928 GAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGE 965
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 700 GAKVVRVYPYKGGQDSRIGPGFCPGQN-FTGLPAILGE 810
GA + YP GQD GP PG++ G P + GE
Sbjct: 927 GAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGE 964
>Z82256-1|CAB05113.1| 627|Caenorhabditis elegans Hypothetical
protein B0513.1 protein.
Length = 627
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 8/44 (18%)
Frame = -3
Query: 790 AP*NFGRGKTPA--------QYGNPGPLCTGKPEPLLPPNSSFP 683
AP NFG P QY NP PL P+PL+ P+ P
Sbjct: 47 APDNFGNHAVPFMPTLGMLNQYQNPHPLQMVPPQPLVTPSQVLP 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,315,260
Number of Sequences: 27780
Number of extensions: 497571
Number of successful extensions: 1317
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -