Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40149
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   1.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   4.7  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   6.2  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   6.2  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +3

Query: 705 KSGSG-LPVQRGPGFPYWAGVLPRPKFYGATCNS----WRKTGXKKGLL 836
           +SG G +PV+   G   W GVL   +    +C+     W   G +  LL
Sbjct: 404 ESGEGTIPVKSSEGIQTWDGVLMGQRLLTMSCSDKIARWNVLGVQGALL 452


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 680 VKQGL*ETPLSGFLMGRFLHRTWKSFSFCLTCVERN 573
           + +GL  TP  G ++ RF H     FS+ +    RN
Sbjct: 459 LSRGLDFTP-RGAVLARFTHLNHADFSYTIVINNRN 493


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 614 WKSFSFCLTCVERNVPVPLEENDVRVXNGRGG 519
           W+  +F    +ERN  VP   N V    G+GG
Sbjct: 78  WRDKTF--VTIERNNGVPSSLNVVTNKKGKGG 107


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 174 CCCFPCTSLE 203
           C C PCTS+E
Sbjct: 113 CMCRPCTSVE 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,643
Number of Sequences: 438
Number of extensions: 6174
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)