Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40147
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.4  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 361 SPXVHMNVECNWKNRPSRVL 302
           +P   + +ECNW + P+  L
Sbjct: 9   NPQFGLQLECNWSSGPNATL 28


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 551 LAGDLVVDPGPQVRAST*TPGVPSSPQPMPQAT 453
           LA  LV +PG    ++T +  V +SP PMP  T
Sbjct: 95  LASPLVQEPGSSTTSAT-SGAVMASP-PMPITT 125


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 77  RFPLLKSLCITISLTVL 27
           +FPLL +L I ISL  L
Sbjct: 121 QFPLLSTLIIIISLGCL 137


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 77  RFPLLKSLCITISLTVL 27
           +FPLL +L I ISL  L
Sbjct: 121 QFPLLSTLIIIISLGCL 137


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 77  RFPLLKSLCITISLTVL 27
           +FPLL +L I ISL  L
Sbjct: 121 QFPLLSTLIIIISLGCL 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,325
Number of Sequences: 336
Number of extensions: 3103
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)