Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40146
         (778 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    26   1.5  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    26   1.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   2.0  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   4.6  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 631 TCPIRRQREHELLSAPHPHSGDGGNCCLHQTGR 533
           T  IRRQR   L +   PHS  G      ++GR
Sbjct: 468 TSTIRRQRRTALGNRDEPHSSSGNWSASSESGR 500


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 631 TCPIRRQREHELLSAPHPHSGDGGNCCLHQTGR 533
           T  IRRQR   L +   PHS  G      ++GR
Sbjct: 469 TSTIRRQRRTALGNRDEPHSSSGNWSASSESGR 501


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 604 HELLSAPHPHSGDGGN 557
           H+LLS P P S  GGN
Sbjct: 570 HQLLSGPDPRSALGGN 585


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 313  RYLQHG*FQACLLQRRRS*IYSLLLGEV*PRELFHLVCRIQIP 441
            R L     ++CL   +RS ++ L+ G++   EL H + R+  P
Sbjct: 941  RLLWRNIHRSCLSSLQRSTLFLLVNGKISHGELLHRMNRVPSP 983


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,375
Number of Sequences: 2352
Number of extensions: 16804
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)