Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40146
         (778 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.79 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.79 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.79 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   1.0  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   1.4  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   1.4  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   1.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   4.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   4.2  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
 Frame = +2

Query: 449 LAKVFMSCNLITGMFQRLDKCA----------NRLSHPSACLVKTTISTISGVWVWRGKE 598
           L K++++C+++      L+ CA          + +++     +K  ++TI+GVW+  G  
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIALDRYWAITDPINYAQKRTLKRVLATIAGVWILSGAI 167

Query: 599 LVFPLS--SDW 625
              PL+  +DW
Sbjct: 168 SSPPLAGWNDW 178


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
 Frame = +2

Query: 449 LAKVFMSCNLITGMFQRLDKCA----------NRLSHPSACLVKTTISTISGVWVWRGKE 598
           L K++++C+++      L+ CA          + +++     +K  ++TI+GVW+  G  
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIALDRYWAITDPINYAQKRTLKRVLATIAGVWILSGAI 167

Query: 599 LVFPLS--SDW 625
              PL+  +DW
Sbjct: 168 SSPPLAGWNDW 178


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
 Frame = +2

Query: 449 LAKVFMSCNLITGMFQRLDKCA----------NRLSHPSACLVKTTISTISGVWVWRGKE 598
           L K++++C+++      L+ CA          + +++     +K  ++TI+GVW+  G  
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIALDRYWAITDPINYAQKRTLKRVLATIAGVWILSGAI 167

Query: 599 LVFPLS--SDW 625
              PL+  +DW
Sbjct: 168 SSPPLAGWNDW 178


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 675 EENQETLSQDYFLVGTEPTKTGRKVS 752
           ++ Q+  S DY +VG  P  + R +S
Sbjct: 806 QQQQQQSSSDYLMVGNSPASSPRYLS 831


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 642 SYDWKKLDPSSEENQETLSQDYFLVGTEPTKTGRKVSTRGRYS 770
           +Y WK  + +  ++    S + +L+  +      KVS RG YS
Sbjct: 215 TYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYS 257


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 642 SYDWKKLDPSSEENQETLSQDYFLVGTEPTKTGRKVSTRGRYS 770
           +Y WK  + +  ++    S + +L+  +      KVS RG YS
Sbjct: 266 TYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYS 308


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 642 SYDWKKLDPSSEENQETLSQDYFLVGTEPTKTGRKVSTRGRYS 770
           +Y WK  + +  ++    S + +L+  +      KVS RG YS
Sbjct: 215 TYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYS 257


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 362 EAKSIPYFWEKFDPENYSIWYAEYKY 439
           + K+   + E   P NYS WY  + Y
Sbjct: 189 DTKTSGKYKEYIIPANYSGWYLNHDY 214


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 362 EAKSIPYFWEKFDPENYSIWYAEYKY 439
           + K+   + E   P NYS WY  + Y
Sbjct: 189 DTKTSGKYKEYIIPANYSGWYLNHDY 214


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,076
Number of Sequences: 438
Number of extensions: 4739
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)