Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40145
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.45 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.60 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.60 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.60 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.60 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.60 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.60 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.60 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.4  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 164 PPGKPATSAWPPGLTSLVGSSN 229
           PPGKPATS     L+S   S++
Sbjct: 153 PPGKPATSTTSQNLSSPASSTS 174


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 164 PPGKPATSAWPPGLTSLVGSSN 229
           PPGKPATS     L+S   S++
Sbjct: 153 PPGKPATSTASQNLSSPASSTS 174


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 164 PPGKPATSAWPPGLTSLVGSSN 229
           PPGKPATS     L+S   S++
Sbjct: 153 PPGKPATSTASQNLSSPASSTS 174


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 164 PPGKPATSAWPPGLTSLVGSSN 229
           PPGKPATS     L+S   S++
Sbjct: 153 PPGKPATSTASQNLSSPASSTS 174


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 164 PPGKPATSAWPPGLTSLVGSSN 229
           PPGKPATS     L+S   S++
Sbjct: 153 PPGKPATSTASQNLSSPASSTS 174


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 164 PPGKPATSAWPPGLTSLVGSSN 229
           PPGKPATS     L+S   S++
Sbjct: 109 PPGKPATSTASQNLSSPASSTS 130


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 164 PPGKPATSAWPPGLTSLVGSSN 229
           PPGKPATS     L+S   S++
Sbjct: 153 PPGKPATSTASQNLSSPASSTS 174


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 164 PPGKPATSAWPPGLTSLVGSSN 229
           PPGKPATS     L+S   S++
Sbjct: 153 PPGKPATSTASQNLSSPASSTS 174


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 295 PRITPLAFDTCHLCICQTE 239
           P + P  FD+C +C C  +
Sbjct: 764 PFLIPTGFDSCTVCTCDAK 782


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 508 GWSSRCNYTETLELISQGGWHI 443
           G +    Y E +EL  +GGW +
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 509 PNRNALLLHGRNRQGGSNYTRGLTRGPTTSLFVKLYV 619
           PN   L+  G   +G  NY++        ++F+K  V
Sbjct: 90  PNLKTLVAIGGWNEGSVNYSKMAASSSLRAVFIKSVV 126


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 251 LSNGTLHSLKNRQEK*DQAAMQTW-QASLVDLCYIFRL*CRLLCI 120
           +SN +LHSLKN++     A++Q     SLV  CY  R      C+
Sbjct: 21  VSNVSLHSLKNKR---SGASLQVGILDSLVFKCYNLRRIYYFYCV 62


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 291 ESRRWPLTRVTCASVKRNPSQFEEPT 214
           ESR WP        +  NPS + + T
Sbjct: 534 ESRVWPRAAAAAERLWTNPSDYVKQT 559


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 419 EPIDIYNINVP 451
           +P+D+YN  VP
Sbjct: 267 QPLDLYNFRVP 277


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 454 GWHIYVVDV 428
           GWH Y+ DV
Sbjct: 156 GWHTYIFDV 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,170
Number of Sequences: 336
Number of extensions: 3567
Number of successful extensions: 25
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)