Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40145
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein.                   30   9.3  
D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein.           30   9.3  
BC126143-1|AAI26144.1|  391|Homo sapiens ectodysplasin A protein.      30   9.3  
BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein.         30   9.3  
AL450449-4|CAM14498.1|  389|Homo sapiens ectodysplasin A protein.      30   9.3  
AL450449-3|CAI39806.2|  391|Homo sapiens ectodysplasin A protein.      30   9.3  
AL158141-5|CAM17680.1|  389|Homo sapiens ectodysplasin A protein.      30   9.3  
AL158141-4|CAI40385.2|  391|Homo sapiens ectodysplasin A protein.      30   9.3  
AL158069-4|CAM24742.1|  389|Homo sapiens ectodysplasin A protein.      30   9.3  
AL158069-3|CAI41612.2|  391|Homo sapiens ectodysplasin A protein.      30   9.3  
AF061189-1|AAC77371.1|  389|Homo sapiens ectodysplasin-A isoform...    30   9.3  
AF060999-1|AAC36302.1|  391|Homo sapiens ectodysplasin-A EDA iso...    30   9.3  
AF060998-1|AAC36303.1|  259|Homo sapiens ectodysplasin-A EDA iso...    30   9.3  
AF040628-1|AAC77363.1|  391|Homo sapiens ectodysplasin-A protein.      30   9.3  
AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein.              30   9.3  

>Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein.
          Length = 1071

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 300 CNISKFTNSFHEAPCKRSNFFLLLRSV 380
           C ++     F E P  R+NFFLLL++V
Sbjct: 829 CTLNMINKDFEEYPEHRTNFFLLLQAV 855


>D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein.
          Length = 1071

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 300 CNISKFTNSFHEAPCKRSNFFLLLRSV 380
           C ++     F E P  R+NFFLLL++V
Sbjct: 829 CTLNMINKDFEEYPEHRTNFFLLLQAV 855


>BC126143-1|AAI26144.1|  391|Homo sapiens ectodysplasin A protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 218 GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 256


>BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein.
          Length = 1071

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 300 CNISKFTNSFHEAPCKRSNFFLLLRSV 380
           C ++     F E P  R+NFFLLL++V
Sbjct: 829 CTLNMINKDFEEYPEHRTNFFLLLQAV 855


>AL450449-4|CAM14498.1|  389|Homo sapiens ectodysplasin A protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 218 GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 256


>AL450449-3|CAI39806.2|  391|Homo sapiens ectodysplasin A protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 218 GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 256


>AL158141-5|CAM17680.1|  389|Homo sapiens ectodysplasin A protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 218 GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 256


>AL158141-4|CAI40385.2|  391|Homo sapiens ectodysplasin A protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 218 GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 256


>AL158069-4|CAM24742.1|  389|Homo sapiens ectodysplasin A protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 218 GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 256


>AL158069-3|CAI41612.2|  391|Homo sapiens ectodysplasin A protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 218 GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 256


>AF061189-1|AAC77371.1|  389|Homo sapiens ectodysplasin-A isoform
           EDA-A2 protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 218 GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 256


>AF060999-1|AAC36302.1|  391|Homo sapiens ectodysplasin-A EDA
           isoform II protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 218 GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 256


>AF060998-1|AAC36303.1|  259|Homo sapiens ectodysplasin-A EDA
           isoform II protein.
          Length = 259

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 86  GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 124


>AF040628-1|AAC77363.1|  391|Homo sapiens ectodysplasin-A protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 161 GPPGKPATSAWPPGLTSLVGSSNCEGFRLTDAQVTRVKGQ 280
           GPPG P     PPGL    G+++  G R     V  ++GQ
Sbjct: 218 GPPGPPGPQG-PPGLQGPSGAADKAGTRENQPAVVHLQGQ 256


>AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein.
          Length = 1071

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 300 CNISKFTNSFHEAPCKRSNFFLLLRSV 380
           C ++     F E P  R+NFFLLL++V
Sbjct: 829 CTLNMINKDFEEYPEHRTNFFLLLQAV 855


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,174,101
Number of Sequences: 237096
Number of extensions: 2323616
Number of successful extensions: 5232
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5232
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)