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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40145
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical...    29   3.2  
AF067612-4|AAM98010.1|  749|Caenorhabditis elegans Egg laying de...    29   3.2  
AF067612-3|AAU05567.1|  743|Caenorhabditis elegans Egg laying de...    29   3.2  
AF067612-2|AAD36953.1|  737|Caenorhabditis elegans Egg laying de...    29   3.2  
AF067612-1|AAD36954.1|  780|Caenorhabditis elegans Egg laying de...    29   3.2  
Z81086-3|CAD56586.1|  711|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr...    27   9.9  
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll...    27   9.9  
J05067-1|AAB59179.1|  313|Caenorhabditis elegans clb-2 protein.        27   9.9  

>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
            protein Y75B8A.13 protein.
          Length = 1420

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 36   AAGQEAQRAGIDSGF--TPRP*SNSGTFGHDTQQSALQPEDITQ 161
            AAGQEAQR   DS F  T    S +G        SA +P+DI Q
Sbjct: 1277 AAGQEAQRPEQDSRFPETSSMPSGAGEQEDQASGSAPEPDDILQ 1320


>AF067612-4|AAM98010.1|  749|Caenorhabditis elegans Egg laying
           defective protein 4,isoform c protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 45  QEAQRAGIDSGFTPRP*SNSGTFGHDTQQSALQPEDITQ 161
           Q+AQ A    G  P P   +   G+D QQ A+ P D  Q
Sbjct: 89  QKAQSAASPGGQPPSPSPRTDQLGNDLQQKAVLPADGVQ 127


>AF067612-3|AAU05567.1|  743|Caenorhabditis elegans Egg laying
           defective protein 4,isoform e protein.
          Length = 743

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 45  QEAQRAGIDSGFTPRP*SNSGTFGHDTQQSALQPEDITQ 161
           Q+AQ A    G  P P   +   G+D QQ A+ P D  Q
Sbjct: 83  QKAQSAASPGGQPPSPSPRTDQLGNDLQQKAVLPADGVQ 121


>AF067612-2|AAD36953.1|  737|Caenorhabditis elegans Egg laying
           defective protein 4,isoform b protein.
          Length = 737

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 45  QEAQRAGIDSGFTPRP*SNSGTFGHDTQQSALQPEDITQ 161
           Q+AQ A    G  P P   +   G+D QQ A+ P D  Q
Sbjct: 77  QKAQSAASPGGQPPSPSPRTDQLGNDLQQKAVLPADGVQ 115


>AF067612-1|AAD36954.1|  780|Caenorhabditis elegans Egg laying
           defective protein 4,isoform a protein.
          Length = 780

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 45  QEAQRAGIDSGFTPRP*SNSGTFGHDTQQSALQPEDITQ 161
           Q+AQ A    G  P P   +   G+D QQ A+ P D  Q
Sbjct: 120 QKAQSAASPGGQPPSPSPRTDQLGNDLQQKAVLPADGVQ 158


>Z81086-3|CAD56586.1|  711|Caenorhabditis elegans Hypothetical
           protein F53B6.2b protein.
          Length = 711

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -2

Query: 211 RSETRRPCRRGRLPWWTCVISSGCSADCCVS 119
           R    RPC R   P W     S CS+  CVS
Sbjct: 526 RPPETRPCHREDCPRWEASQWSECSSQRCVS 556


>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
           protein F53B6.2a protein.
          Length = 1045

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -2

Query: 211 RSETRRPCRRGRLPWWTCVISSGCSADCCVS 119
           R    RPC R   P W     S CS+  CVS
Sbjct: 860 RPPETRPCHREDCPRWEASQWSECSSQRCVS 890


>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
            K04H4.1b protein.
          Length = 1502

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +2

Query: 161  GPPGKPATSAWP--PGLTSLVGSSNCEGFR 244
            G PG P T  +P  PGL+ + G    +GF+
Sbjct: 1220 GYPGAPGTDGYPGPPGLSGMPGHGGDQGFQ 1249


>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
            K04H4.1a protein.
          Length = 1759

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +2

Query: 161  GPPGKPATSAWP--PGLTSLVGSSNCEGFR 244
            G PG P T  +P  PGL+ + G    +GF+
Sbjct: 1477 GYPGAPGTDGYPGPPGLSGMPGHGGDQGFQ 1506


>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
            protein.
          Length = 1758

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +2

Query: 161  GPPGKPATSAWP--PGLTSLVGSSNCEGFR 244
            G PG P T  +P  PGL+ + G    +GF+
Sbjct: 1476 GYPGAPGTDGYPGPPGLSGMPGHGGDQGFQ 1505


>J05067-1|AAB59179.1|  313|Caenorhabditis elegans clb-2 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +2

Query: 161 GPPGKPATSAWP--PGLTSLVGSSNCEGFR 244
           G PG P T  +P  PGL+ + G    +GF+
Sbjct: 31  GYPGAPGTDGYPGPPGLSGMPGHGGDQGFQ 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,314,094
Number of Sequences: 27780
Number of extensions: 350391
Number of successful extensions: 857
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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