Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40143
         (846 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   7.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   7.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   7.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   7.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 90  FFRLSRTQQSALLVPSIVY 146
           +FRLS+T+    LV ++VY
Sbjct: 397 YFRLSKTKTFCTLVTALVY 415


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 416 FLYPSVIVVWKCVIIFHAYKCIIL 487
           F+Y   + VWKC++ F +   I+L
Sbjct: 297 FIY-MFVSVWKCLLFFVSVLFILL 319


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 416 FLYPSVIVVWKCVIIFHAYKCIIL 487
           F+Y   + VWKC++ F +   I+L
Sbjct: 297 FIY-MFVSVWKCLLFFVSVLFILL 319


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 416 FLYPSVIVVWKCVIIFHAYKCIIL 487
           F+Y   + VWKC++ F +   I+L
Sbjct: 297 FIY-MFVSVWKCLLFFVSVLFILL 319


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 416 FLYPSVIVVWKCVIIFHAYKCIIL 487
           F+Y   + VWKC++ F +   I+L
Sbjct: 297 FIY-MFVSVWKCLLFFVSVLFILL 319


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 75  CHVFFFFRLSRTQQSALLVPSIVYRYIQ 158
           C + FF  L   Q S L    ++Y Y Q
Sbjct: 16  CCILFFIYLYWQQTSNLTTSKLLYTYRQ 43


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -2

Query: 152 ISVNY*RHQQRR 117
           ++VNY RH+Q+R
Sbjct: 397 VTVNYYRHKQKR 408


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,949
Number of Sequences: 336
Number of extensions: 4621
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)