Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40142
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5C8A Cluster: PREDICTED: similar to formin 1,2...    38   0.27 
UniRef50_Q677T4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.7  
UniRef50_A5CVM5 Cluster: Bifunctional biotin biosynthesis protei...    33   7.6  
UniRef50_A0BUF9 Cluster: Chromosome undetermined scaffold_129, w...    33   7.6  
UniRef50_Q60CK1 Cluster: D-alanyl-D-alanine carboxypeptidase; n=...    33   10.0 

>UniRef50_UPI00015B5C8A Cluster: PREDICTED: similar to formin
           1,2/cappuccino; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to formin 1,2/cappuccino - Nasonia vitripennis
          Length = 1271

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = -2

Query: 719 GCPGPLQPGNALLLPR*KIGKAGWYLPARTHKRSPPVPPDIP 594
           G P PL PG    LP   +G  GW  P+R   R PPV P+ P
Sbjct: 640 GPPPPLPPGGPAALPLPPVG--GWNPPSRAMIRKPPVNPETP 679


>UniRef50_Q677T4 Cluster: Putative uncharacterized protein; n=1;
           Lymphocystis disease virus - isolate China|Rep: Putative
           uncharacterized protein - Lymphocystis disease virus -
           isolate China
          Length = 304

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = -3

Query: 223 VIFVNSKLIKQIHATTLK*KFSFKIVLLNKDHRGSCISKI*IFSKQSLLWDSKNYASLAQ 44
           V+    ++  +  A  L  +F  KI+ L +D RGS  SKI  F++    ++ K  A + Q
Sbjct: 150 VVIKTVRIRNKTQALELMTQFDIKIIHLVRDPRGSFNSKIKTFNRD---YNFKQIAKICQ 206

Query: 43  DGVVYFLTYLDR 8
           D +  + T  DR
Sbjct: 207 DDIDIYETLKDR 218


>UniRef50_A5CVM5 Cluster: Bifunctional biotin biosynthesis protein
           BirA; n=2; sulfur-oxidizing symbionts|Rep: Bifunctional
           biotin biosynthesis protein BirA - Vesicomyosocius
           okutanii subsp. Calyptogena okutanii (strain HA)
          Length = 252

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -1

Query: 180 LHLNKNSHSKLFC*IRIIGDHAFQKFKSSVNKVFYGIVKITPHWRKMALFT 28
           LHL+KN  +K+   + I     F KF +  +K+ Y + K   H  KM LF+
Sbjct: 170 LHLSKNLINKILEYLDIFESSGFDKFYNEWSKIDYLLGKQVKHTNKMQLFS 220


>UniRef50_A0BUF9 Cluster: Chromosome undetermined scaffold_129,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_129,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 307

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -3

Query: 310 LFQNDSQCCKCQLKQCFVKLNQIINWISLVIFVNSKL 200
           LF N    CK +LK+C+  L+  INWI+L+ F  + L
Sbjct: 140 LFHNQKVKCKSKLKECYKLLS--INWINLLDFSKNDL 174


>UniRef50_Q60CK1 Cluster: D-alanyl-D-alanine carboxypeptidase; n=1;
           Methylococcus capsulatus|Rep: D-alanyl-D-alanine
           carboxypeptidase - Methylococcus capsulatus
          Length = 392

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 656 AGWYLPARTHKRSPPVPPDIPFSTYLCQ 573
           AGW LP R      P PP++P   YL Q
Sbjct: 22  AGWCLPLRAEPPLIPAPPELPAKAYLLQ 49


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,443,420
Number of Sequences: 1657284
Number of extensions: 13455570
Number of successful extensions: 31574
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31559
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)