Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40141
         (924 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    28   0.12 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   1.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   1.1  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 594 PGEHFEDYRPWYFNGHDE 647
           P   F DYRPW  +GH E
Sbjct: 486 PWHTFYDYRPWVQHGHQE 503


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 98  HFLLISIKGYIAITFLTCAC*FYY 27
           HFLL +   Y A   L C   FYY
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYY 118



 Score = 24.2 bits (50), Expect = 1.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 576 LYCFYCLISHFDLCYFLCRFFFV 508
           +Y FYC +      Y+ CR F +
Sbjct: 285 IYYFYCALIILLCIYYFCRAFII 307



 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 576 LYCFYCLISHFDLCYFLCRFFFVC 505
           L+C   +I    L + LC ++F C
Sbjct: 267 LFCCAFIIFTMHLLFLLCIYYFYC 290



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 567 FYCLISHFDLCYFLCRFFF 511
           FYC    F + + LC ++F
Sbjct: 85  FYCPFIIFTVHFLLCTYYF 103


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 743 SFHGQSTGFGLKFGYPEFWKSLGRKRVPPPGSF-IVAIKIP 624
           SFH  + G+GL+   PE    +     PPPGS   + + +P
Sbjct: 190 SFHHDAAGYGLRNYGPE---PVPSTPYPPPGSLGSMGVSVP 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,698
Number of Sequences: 336
Number of extensions: 5690
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25858250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)