Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40141
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0157 + 15814618-15814803,15814846-15815008,15815444-158154...    30   3.0  
04_03_1020 - 21761297-21761555,21761630-21761739,21762402-217626...    29   3.9  
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365...    29   5.2  
03_01_0299 - 2323945-2324422,2324542-2324671,2324763-2324898           29   6.9  
07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871     28   9.1  

>02_03_0157 +
           15814618-15814803,15814846-15815008,15815444-15815492,
           15815839-15816217
          Length = 258

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 742 DSRNIALYWEVIPEKVQSDCL 804
           D  N+AL W ++P  V+SDCL
Sbjct: 147 DGLNLALQWTLLPIAVESDCL 167


>04_03_1020 -
           21761297-21761555,21761630-21761739,21762402-21762635,
           21762710-21762817,21762910-21762969,21763549-21763624,
           21763710-21763870,21764485-21764547,21764657-21764744,
           21765062-21765592,21766344-21766783
          Length = 709

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
 Frame = -3

Query: 283 YGKEYFERVGSLYLNFMSFTTYHK----HRSVKSKVIFQITTQILT-LCYLNFIGQSSLH 119
           YG E  +   S+YL F+S  + HK    +   K  VI   T QIL+ L YL+  G++++H
Sbjct: 370 YGSEMTDDALSIYLEFVSGGSIHKLLREYGPFKEPVIRNYTGQILSGLAYLH--GRNTVH 427


>07_03_0111 + 13535912-13535972,13536081-13536142,13536418-13536510,
            13537577-13537649,13537876-13538265,13538337-13538404,
            13539334-13539375,13540211-13540735,13540817-13540974,
            13541078-13541636,13542438-13542500,13542579-13542680,
            13542779-13543096,13543175-13543267,13543489-13543590,
            13543678-13543782,13544190-13544323,13545097-13545280,
            13545701-13545832,13546215-13546327,13546468-13546558,
            13547138-13549339
          Length = 1889

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 840  PFNPGLGTPKITQAIALDFFWNNLPV*SNIPGIIPWPIH 724
            PFNP    P I   +A+      LP    IPG+ PWP++
Sbjct: 1597 PFNPS--PPAILSPLAVSV---GLPPPGAIPGVAPWPVN 1630


>03_01_0299 - 2323945-2324422,2324542-2324671,2324763-2324898
          Length = 247

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 374 KKAENQRSAR-EAIHMVHLQLHHMDLQYNQKMNLIQQ 481
           KKA   R AR + +H   LQ      QY   +NL+QQ
Sbjct: 114 KKARPSRRARAQLLHQYQLQQQQQHRQYLHSLNLLQQ 150


>07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871
          Length = 233

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -2

Query: 674 RKRVPPPGSFIVAIKIPGTVIFKVFAGRRAVFT 576
           R  +PP GS +VA ++P  V+   FAG   VFT
Sbjct: 65  RMMLPPMGSSVVATRVPKKVL--KFAGIEDVFT 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,817,559
Number of Sequences: 37544
Number of extensions: 533780
Number of successful extensions: 1237
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)