Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40141
         (924 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX649449-3|CAH71689.1|  476|Homo sapiens PRAME family member 5 p...    33   1.5  
BC130276-1|AAI30277.1|  476|Homo sapiens PRAME family member 5 p...    33   1.5  
BC130274-1|AAI30275.1|  476|Homo sapiens PRAME family member 5 p...    33   1.5  
BC101344-1|AAI01345.1|  476|Homo sapiens PRAME family member 5 p...    33   1.5  
BC101342-1|AAI01343.1|  476|Homo sapiens PRAME family member 6 p...    33   1.5  
AL358783-3|CAH73924.1|  476|Homo sapiens PRAME family member 6 p...    33   1.5  
AY017378-1|AAG54076.1| 1025|Homo sapiens RNA helicase-DEAD box p...    31   4.5  

>BX649449-3|CAH71689.1|  476|Homo sapiens PRAME family member 5
           protein.
          Length = 476

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -3

Query: 271 YFERVGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH-- 98
           +   +  L L+ M  + Y      K +++ Q TTQ L LC L  +  +S+ FL  +    
Sbjct: 230 HMRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQL 288

Query: 97  ISCL 86
           +SCL
Sbjct: 289 LSCL 292


>BC130276-1|AAI30277.1|  476|Homo sapiens PRAME family member 5
           protein.
          Length = 476

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -3

Query: 271 YFERVGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH-- 98
           +   +  L L+ M  + Y      K +++ Q TTQ L LC L  +  +S+ FL  +    
Sbjct: 230 HMRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQL 288

Query: 97  ISCL 86
           +SCL
Sbjct: 289 LSCL 292


>BC130274-1|AAI30275.1|  476|Homo sapiens PRAME family member 5
           protein.
          Length = 476

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -3

Query: 271 YFERVGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH-- 98
           +   +  L L+ M  + Y      K +++ Q TTQ L LC L  +  +S+ FL  +    
Sbjct: 230 HMRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQL 288

Query: 97  ISCL 86
           +SCL
Sbjct: 289 LSCL 292


>BC101344-1|AAI01345.1|  476|Homo sapiens PRAME family member 5
           protein.
          Length = 476

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -3

Query: 271 YFERVGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH-- 98
           +   +  L L+ M  + Y      K +++ Q TTQ L LC L  +  +S+ FL  +    
Sbjct: 230 HMRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQL 288

Query: 97  ISCL 86
           +SCL
Sbjct: 289 LSCL 292


>BC101342-1|AAI01343.1|  476|Homo sapiens PRAME family member 6
           protein.
          Length = 476

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -3

Query: 271 YFERVGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH-- 98
           +   +  L L+ M  + Y      K +++ Q TTQ L LC L  +  +S+ FL  +    
Sbjct: 230 HMRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQL 288

Query: 97  ISCL 86
           +SCL
Sbjct: 289 LSCL 292


>AL358783-3|CAH73924.1|  476|Homo sapiens PRAME family member 6
           protein.
          Length = 476

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -3

Query: 271 YFERVGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH-- 98
           +   +  L L+ M  + Y      K +++ Q TTQ L LC L  +  +S+ FL  +    
Sbjct: 230 HMRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQL 288

Query: 97  ISCL 86
           +SCL
Sbjct: 289 LSCL 292


>AY017378-1|AAG54076.1| 1025|Homo sapiens RNA helicase-DEAD box
           protein RH116 protein.
          Length = 1025

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 19/78 (24%), Positives = 37/78 (47%)
 Frame = +2

Query: 266 KILFTIT*YSYYCSINHIPAAS**TSQIHQMKVPAVKKAENQRSAREAIHMVHLQLHHMD 445
           K+L  +T    YC ++  P +   T    Q  +   KKA  + + +E++   HL+ ++  
Sbjct: 553 KLLEIMTRIQTYCQMS--PMSDFGTQPYEQWAIQMEKKAAKEGNRKESVCAEHLRKYNKA 610

Query: 446 LQYNQKMNLIQQMNIIQT 499
           LQ N  + +I     ++T
Sbjct: 611 LQINDTIRMIDAYTHLET 628


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,596,658
Number of Sequences: 237096
Number of extensions: 3120819
Number of successful extensions: 9554
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9554
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)