Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40140
         (893 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F5N4 Cluster: Peroxisomal membrane anchor protein; n=...   183   5e-45
UniRef50_Q7Q5S5 Cluster: ENSANGP00000020646; n=4; Culicidae|Rep:...    56   2e-06
UniRef50_UPI0000D57079 Cluster: PREDICTED: similar to CG4289-PA;...    47   7e-04
UniRef50_Q9VPB8 Cluster: CG4289-PA; n=2; Sophophora|Rep: CG4289-...    40   0.065
UniRef50_UPI000051A37B Cluster: PREDICTED: similar to CG4289-PA;...    40   0.11 
UniRef50_Q4RKW9 Cluster: Chromosome 1 SCAF15025, whole genome sh...    35   3.2  
UniRef50_A3DI33 Cluster: Putative uncharacterized protein; n=2; ...    33   9.8  

>UniRef50_Q2F5N4 Cluster: Peroxisomal membrane anchor protein; n=1;
           Bombyx mori|Rep: Peroxisomal membrane anchor protein -
           Bombyx mori (Silk moth)
          Length = 247

 Score =  183 bits (446), Expect = 5e-45
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = +2

Query: 2   GSLAYGCYWFYKNCVRHLIFVDQPKRKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQN 181
           GSLAYGCYWFYKNCVRHLIFVDQPKRKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQN
Sbjct: 94  GSLAYGCYWFYKNCVRHLIFVDQPKRKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQN 153

Query: 182 TFRCSLDTIKGDIASVKGILLNRN 253
           TFRCSLDTIKGDIASVKGILLNRN
Sbjct: 154 TFRCSLDTIKGDIASVKGILLNRN 177



 Score =  117 bits (282), Expect = 4e-25
 Identities = 57/74 (77%), Positives = 59/74 (79%)
 Frame = +1

Query: 241 IEQESFPSLKSRTDPPSIPAWQRQSEEATSTEAPGEDKKKTHRARSQRXXXXXXXXXXXX 420
           + +  FPSLKSRTDPPSIPAWQRQSEEATSTEAPGEDKKKTHRARSQR            
Sbjct: 174 LNRNQFPSLKSRTDPPSIPAWQRQSEEATSTEAPGEDKKKTHRARSQRSESGGSNSSEGE 233

Query: 421 QATKNSDSSLEIIQ 462
           QATKNSDSSLEIIQ
Sbjct: 234 QATKNSDSSLEIIQ 247


>UniRef50_Q7Q5S5 Cluster: ENSANGP00000020646; n=4; Culicidae|Rep:
           ENSANGP00000020646 - Anopheles gambiae str. PEST
          Length = 246

 Score = 55.6 bits (128), Expect = 2e-06
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
 Frame = +2

Query: 8   LAYGCYWFYKNCVRHLIFVDQPKRKTTNECLEEVRKS----LEDLNTNVFALKGELNSLQ 175
           L YG Y FYK  +  L+F  + K+KT  E L E+ ++    ++ L+  +  +K ELN + 
Sbjct: 97  LMYGVYLFYKKFIEPLLFRSK-KKKTVTEQLTELNQTMTVKIDTLSAELSKIKAELNQVN 155

Query: 176 Q-NTFRCSLDTIKGDIASVKGILLNR 250
           Q N     L   KGD+ S+KG+LLNR
Sbjct: 156 QTNATVKELANFKGDLDSIKGLLLNR 181



 Score = 35.1 bits (77), Expect = 2.4
 Identities = 21/59 (35%), Positives = 26/59 (44%)
 Frame = +1

Query: 283 PPSIPAWQRQSEEATSTEAPGEDKKKTHRARSQRXXXXXXXXXXXXQATKNSDSSLEII 459
           PPSIPAWQ +S++     + GE     H                     KNSDSSLEI+
Sbjct: 193 PPSIPAWQLRSQQHQPASSEGE-----HDKHDDNDTGSGSGSSENDVVLKNSDSSLEIM 246


>UniRef50_UPI0000D57079 Cluster: PREDICTED: similar to CG4289-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG4289-PA - Tribolium castaneum
          Length = 292

 Score = 46.8 bits (106), Expect = 7e-04
 Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
 Frame = +2

Query: 8   LAYGCYWFYKNCVRHLIFVDQPKRKTTNECLEEVRKSLE----DLNTNVFALKGELNSLQ 175
           +AY  Y FY   +    F    K+K+  E ++E+ KS +    DL  N+ ++K E++ + 
Sbjct: 114 VAYVVYKFYMKFIAPFFF--GKKKKSVEESIDELDKSFKQSVNDLKNNLLSVKVEVDKIS 171

Query: 176 Q---NTFRCSLDTIKGDIASVKGILLNRN 253
           Q   ++ +  L  +K +IA+VKG+LL+RN
Sbjct: 172 QGAESSTQRQLSDLKSEIATVKGLLLSRN 200



 Score = 35.9 bits (79), Expect = 1.4
 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = +1

Query: 241 IEQESFPSL-KSRTDPPSIPAWQRQSEEATSTEAPGEDKKKTHRARSQRXXXXXXXXXXX 417
           + +  FP + KS    PSIPAWQ+ S    S   P  D ++  +A               
Sbjct: 197 LSRNQFPPVSKSSVVRPSIPAWQKTSISQDSD--PDSDPER--KAEELMEVGSGSGSSEH 252

Query: 418 XQATKNSDSSLEII 459
             A KNSDSSL+II
Sbjct: 253 EHAAKNSDSSLDII 266


>UniRef50_Q9VPB8 Cluster: CG4289-PA; n=2; Sophophora|Rep: CG4289-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 280

 Score = 40.3 bits (90), Expect = 0.065
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
 Frame = +2

Query: 8   LAYGCYWFYKNCVRHLIFVDQPKRKTTNECLEEVRKSLE----DLNTNVFALKGELNSLQ 175
           + Y  Y F+K  +   +F  + K+K  +E L+++ K +E    DLN  + A++  + + Q
Sbjct: 129 VVYAVYIFWKQYIAPYLF-GKSKKKAVDEVLDDIDKKVETRTNDLNKEILAVRDLITTQQ 187

Query: 176 QN---TFRCSLDTIKGDIASVKGILLNR 250
           +             + D+ ++KG+LLNR
Sbjct: 188 REHAQQLNREFSNFRSDLDAIKGLLLNR 215


>UniRef50_UPI000051A37B Cluster: PREDICTED: similar to CG4289-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG4289-PA
           - Apis mellifera
          Length = 265

 Score = 39.5 bits (88), Expect = 0.11
 Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
 Frame = +2

Query: 2   GSLAYGCYWFYKNCVRHLIFVDQPK---RKTTNECLEEVRKSLEDLNTNVFALKGELNSL 172
           G   Y  YWFYK  +  L+F  + K   + +  E  + ++ S++++  ++  ++ ++  L
Sbjct: 114 GVTIYCVYWFYKKFIEPLLFGRKKKDSIKDSVTELDKSIQNSMKEVKQSISKVEEDVQKL 173

Query: 173 QQNTFRCSL-----DTIKGDIASVKGILLNR 250
            QN     +       +K D+AS+K +LL+R
Sbjct: 174 TQNQSMDPMIPQLVQELKQDLASLKSLLLSR 204


>UniRef50_Q4RKW9 Cluster: Chromosome 1 SCAF15025, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 1 SCAF15025, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 858

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
 Frame = +2

Query: 56  IFVDQPKRKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQN--TFRCSLDTIKGDIASV 229
           +FV Q +     + LE+VR ++++L +++  L+G LNS ++   + R  LD  + ++A++
Sbjct: 470 LFVLQEENSKKEKILEDVRLTVKNLESSLVQLQGALNSREREIISLRRQLDACQEELAAL 529

Query: 230 K 232
           K
Sbjct: 530 K 530


>UniRef50_A3DI33 Cluster: Putative uncharacterized protein; n=2;
           Clostridium|Rep: Putative uncharacterized protein -
           Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
          Length = 530

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +2

Query: 47  RHLIFVDQPKRKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQNTFRCSLDTIKGD 217
           R +I V    R T  E LEEV K++E L   +  +K E+N+  +N     + ++K +
Sbjct: 399 RTVISVKGFNRNTLKERLEEVMKNIETLKNELVKVKAEVNAYFENEQNGKVGSLKAE 455


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,697,141
Number of Sequences: 1657284
Number of extensions: 16695801
Number of successful extensions: 48763
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 46359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48737
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)