Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40140
         (893 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    27   0.58 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   7.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   7.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.5  

>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 27.5 bits (58), Expect = 0.58
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 577 LIYVHLNDIEAHRWVAQCPCQGRW 506
           L + H   ++ H ++  CPC GR+
Sbjct: 12  LTFAHSITVDEHGYIMYCPCMGRF 35


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 505  WRHEYVEGR 479
            WRHE+V+GR
Sbjct: 1214 WRHEFVDGR 1222


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 505  WRHEYVEGR 479
            WRHE+V+GR
Sbjct: 1215 WRHEFVDGR 1223


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 11/56 (19%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +2

Query: 74  KRKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQNTFRCS--LDTIKGDIASVKG 235
           K++      ++ ++ +E+LN  +  L+  +   ++   +CS  +  ++  IA  KG
Sbjct: 728 KQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGKG 783


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 871,130
Number of Sequences: 2352
Number of extensions: 16958
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)