Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40140
         (893 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089608-1|AAL90346.1|  280|Drosophila melanogaster RE22286p pro...    40   0.003
AE014296-3414|AAF51637.1|  280|Drosophila melanogaster CG4289-PA...    40   0.003
AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB...    29   6.5  
AE014297-2653|AAN13799.1|  274|Drosophila melanogaster CG31404-P...    29   8.6  

>AY089608-1|AAL90346.1|  280|Drosophila melanogaster RE22286p
           protein.
          Length = 280

 Score = 40.3 bits (90), Expect = 0.003
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
 Frame = +2

Query: 8   LAYGCYWFYKNCVRHLIFVDQPKRKTTNECLEEVRKSLE----DLNTNVFALKGELNSLQ 175
           + Y  Y F+K  +   +F  + K+K  +E L+++ K +E    DLN  + A++  + + Q
Sbjct: 129 VVYAVYIFWKQYIAPYLF-GKSKKKAVDEVLDDIDKKVETRTNDLNKEILAVRDLITTQQ 187

Query: 176 QN---TFRCSLDTIKGDIASVKGILLNR 250
           +             + D+ ++KG+LLNR
Sbjct: 188 REHAQQLNREFSNFRSDLDAIKGLLLNR 215


>AE014296-3414|AAF51637.1|  280|Drosophila melanogaster CG4289-PA
           protein.
          Length = 280

 Score = 40.3 bits (90), Expect = 0.003
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
 Frame = +2

Query: 8   LAYGCYWFYKNCVRHLIFVDQPKRKTTNECLEEVRKSLE----DLNTNVFALKGELNSLQ 175
           + Y  Y F+K  +   +F  + K+K  +E L+++ K +E    DLN  + A++  + + Q
Sbjct: 129 VVYAVYIFWKQYIAPYLF-GKSKKKAVDEVLDDIDKKVETRTNDLNKEILAVRDLITTQQ 187

Query: 176 QN---TFRCSLDTIKGDIASVKGILLNR 250
           +             + D+ ++KG+LLNR
Sbjct: 188 REHAQQLNREFSNFRSDLDAIKGLLLNR 215


>AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB,
           isoform B protein.
          Length = 2197

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 22/76 (28%), Positives = 30/76 (39%)
 Frame = +1

Query: 157 RIEFPPAKHV*VQSRHY*R*YSFS*RDFIEQESFPSLKSRTDPPSIPAWQRQSEEATSTE 336
           RI  P A  V   + +Y   YS      +EQ SFP   + T  P +P     S  A  T 
Sbjct: 117 RIHTPNASDVGALNENYRSVYSTPSTQLVEQRSFPKSSTATKDPPLPI----SNPARGTF 172

Query: 337 APGEDKKKTHRARSQR 384
             G+       +R +R
Sbjct: 173 FRGDSASSDSHSRLRR 188


>AE014297-2653|AAN13799.1|  274|Drosophila melanogaster CG31404-PA
           protein.
          Length = 274

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 235 DFIEQES-FPSLKSRTDPPSIPAWQRQSEEATSTEAPGEDKKKT 363
           +F+EQE+ F   K +  PPS  AW  ++ +      P E +K T
Sbjct: 28  EFVEQETLFVKPKVQGPPPSWAAWCERNSKPVKRVRPRESRKLT 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,892,158
Number of Sequences: 53049
Number of extensions: 795728
Number of successful extensions: 2140
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2138
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)