Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40138
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.15 
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    24   1.8  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    24   1.8  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   7.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = -1

Query: 706 FLAFGIHPAFHQACIQAYRPAYLLACHPAFHPAFLL-ACHPAFLLACHPAFLLACRWAPH 530
           F+ F +H  F         P + L C   F+ AF++   H  FLL  +  F     +  H
Sbjct: 120 FIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMH 179

Query: 529 RASCS*PRTHSLHILQLV 476
              C      ++H+L L+
Sbjct: 180 LLFCCAFIFFNMHLLFLL 197


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 84  DSPSRSERWPKKVV 43
           DSPS  E+W +KVV
Sbjct: 59  DSPSTGEQWMQKVV 72


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 84  DSPSRSERWPKKVV 43
           DSPS  E+W +KVV
Sbjct: 59  DSPSTGEQWMQKVV 72


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 573 HATRHSSWHAAGRRTVHL 520
           H+TRH++  AA R+ + L
Sbjct: 287 HSTRHAATSAAARKGISL 304


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 38  GPTTFLGHLSDLDGESRAPRPR 103
           G + F G L     ESR PRP+
Sbjct: 197 GHSGFWGQLGAAVDESRTPRPK 218


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 791 FLVVSSPHLYTNVILI*ELFMYKIN 865
           F++ +S  +YTN++ I E    K+N
Sbjct: 178 FMIFTSTCIYTNLLRIIEADFSKLN 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,432
Number of Sequences: 336
Number of extensions: 4756
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)