Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40137
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   159   1e-39
Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z75527-3|CAA99777.1|  428|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical...    27   6.0  
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical...    27   6.0  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  159 bits (385), Expect = 1e-39
 Identities = 74/85 (87%), Positives = 79/85 (92%)
 Frame = +1

Query: 1   LPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP 180
           LPHSAGR+  +RFRKA CPIVERL NSLMMHGRNNGKKLM VRIVKHAFEII+LLTGENP
Sbjct: 55  LPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENP 114

Query: 181 LQVLVTAIINSGPREDSTRIGRAGT 255
           +QVLV A+INSGPREDSTRIGRAGT
Sbjct: 115 VQVLVNAVINSGPREDSTRIGRAGT 139



 Score =  144 bits (349), Expect = 3e-35
 Identities = 69/73 (94%), Positives = 72/73 (98%)
 Frame = +3

Query: 249 GYVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIK 428
           G VRRQAVDV+PLRRVNQAIWLLCTGAREAAFRN+KTIAEC+ADELINAAKGSSNSYAIK
Sbjct: 138 GTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIK 197

Query: 429 KKDELERVAKSNR 467
           KKDELERVAKSNR
Sbjct: 198 KKDELERVAKSNR 210


>Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical
           protein F34D10.4 protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = +3

Query: 288 RRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 467
           +RV   +    T    A  RN   + E  A+E I A +   N +A+K +   +  A SNR
Sbjct: 474 QRVQDTVQKARTAVGYAGTRNRSPLREADAEE-IAATEALKNRFAVKSRGTAKAKANSNR 532

Query: 468 *NILLSHL 491
              LL  +
Sbjct: 533 GAALLESI 540


>Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical
           protein C26C6.8 protein.
          Length = 273

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 295 STKQSGFCAQVHVRLHSEILKQSQSVLQ 378
           S  QSGF    HV++  EIL+Q+  V++
Sbjct: 178 SDNQSGFVPSSHVKIPHEILQQASRVIK 205


>Z75527-3|CAA99777.1|  428|Caenorhabditis elegans Hypothetical
           protein C15C8.3 protein.
          Length = 428

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 275 INGLTTNVPARPILVESSRGPELIMAVTSTCRGFSP 168
           ING T N+P+   +V +  GP +      T  GF P
Sbjct: 364 INGKTYNMPSTSFVVSAGPGPCMFAFYELTAGGFYP 399


>AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical
           protein T24C4.7 protein.
          Length = 798

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +1

Query: 205 INSGPREDSTRIGRAGTFVVKPLMFHPCAESTKQSGFCAQV----HVRLHSEILKQSQSV 372
           I S  + D T +G       + L+F  C  + + S FC ++    H R HS   +  +S 
Sbjct: 562 IESSQKYDLTAMGDIARESSRCLLFRNCLCTNQMSRFCCKLVGREHCRFHSVYPENDESY 621

Query: 373 LQMN 384
            +M+
Sbjct: 622 AKMD 625


>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
           protein F15E6.1 protein.
          Length = 1655

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 22/84 (26%), Positives = 35/84 (41%)
 Frame = +1

Query: 190 LVTAIINSGPREDSTRIGRAGTFVVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQS 369
           +V ++  S PR+  T   +     +  L+     E T QSG  A    R  S    ++Q+
Sbjct: 641 MVQSVFESKPRQPDTPKDKETISKIADLLRFSADEFTGQSGSSAAARQRTVSGSAARAQT 700

Query: 370 VLQMN*LMQLRVHLTPTPSKRRTS 441
             QM+   Q   H  P   ++R S
Sbjct: 701 -YQMHHQQQQHHHQMPMDQRKRPS 723


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,890,508
Number of Sequences: 27780
Number of extensions: 240330
Number of successful extensions: 716
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)