Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40137
(509 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 3.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 3.2
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 3.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 3.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 3.2
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 5.6
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 5.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.6
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 5.6
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 7.4
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 9.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.8
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/28 (32%), Positives = 10/28 (35%)
Frame = -1
Query: 377 CNTLCDCFNISECSLTCTCAQKPDCLVD 294
C LC C + C TC C D
Sbjct: 743 CFALCHCCDFDACDCEMTCPAGCKCYND 770
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 3.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 31 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 132
+R R + I+ L+N + + NN KKL I
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 3.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 31 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 132
+R R + I+ L+N + + NN KKL I
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.2 bits (45), Expect = 3.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 31 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 132
+R R + I+ L+N + + NN KKL I
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 3.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 31 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 132
+R R + I+ L+N + + NN KKL I
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 3.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 31 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 132
+R R + I+ L+N + + NN KKL I
Sbjct: 305 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 338
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 130 IVKHAFEIIHLLTGENPLQVLVTAII 207
+++HAFEI +L P+ +++ I
Sbjct: 217 LIEHAFEISTMLFFVLPMTIIIVLYI 242
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 5.6
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = -1
Query: 98 RPCIIREFVRRSTIGHWAL 42
+ +++E +R+ GHW +
Sbjct: 63 KKALMKERIRQKAAGHWVI 81
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 5.6
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = -1
Query: 98 RPCIIREFVRRSTIGHWAL 42
+ +++E +R+ GHW +
Sbjct: 63 KKALMKERIRQKAAGHWVI 81
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 5.6
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = -1
Query: 98 RPCIIREFVRRSTIGHWAL 42
+ +++E +R+ GHW +
Sbjct: 63 KKALMKERIRQKAAGHWVI 81
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.4 bits (43), Expect = 5.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 80 EFVRRSTIGHWALRKRLCAYLPAE 9
EF R T AL K+LC PAE
Sbjct: 585 EFPRSITRNATALIKKLCRDNPAE 608
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 503 LFIVKMT**YILTVGFSNTLQLVLLFDGVG 414
+F +++ +LTVG ++ LF G+G
Sbjct: 34 MFFMELALGQMLTVGGLGVFKIAPLFKGIG 63
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 20.6 bits (41), Expect = 9.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 252 YVRRQAVDVSPLRRVNQAIW 311
Y Q V VSP R + IW
Sbjct: 271 YCEPQVVIVSPTRELTIQIW 290
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 9.8
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 129 YCQTCV*NYSLVNWRKP 179
+CQ S + WRKP
Sbjct: 24 FCQPTQRTMSKIQWRKP 40
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,888
Number of Sequences: 438
Number of extensions: 2884
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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