Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40136
(542 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4PMN9 Cluster: Salivary selenoprotein M; n=1; Ixodes s... 57 2e-07
UniRef50_UPI00015B4977 Cluster: PREDICTED: similar to selenoprot... 56 4e-07
UniRef50_UPI0000D56FD2 Cluster: PREDICTED: similar to Selenoprot... 56 7e-07
UniRef50_A5J2A1 Cluster: Selenoprotein M; n=1; Litopenaeus vanna... 55 1e-06
UniRef50_UPI00005A4A0E Cluster: PREDICTED: similar to selenoprot... 53 4e-06
UniRef50_UPI0000D9C91D Cluster: PREDICTED: similar to selenoprot... 51 2e-05
UniRef50_Q8WWX9 Cluster: Thioredoxin-like selenoprotein M precur... 51 2e-05
UniRef50_Q4A3I8 Cluster: Selenoprotein M; n=1; Suberites domuncu... 49 6e-05
UniRef50_Q8H6T5 Cluster: Selenoprotein SelM2; n=1; Chlamydomonas... 42 0.012
UniRef50_A0C174 Cluster: Chromosome undetermined scaffold_141, w... 37 0.26
UniRef50_A2EF91 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q8H6T0 Cluster: Selenoprotein SelM1; n=1; Chlamydomonas... 33 4.3
UniRef50_UPI00006CB2D2 Cluster: hypothetical protein TTHERM_0045... 33 5.6
UniRef50_Q7RRG3 Cluster: Putative uncharacterized protein PY0075... 33 5.6
UniRef50_Q24E40 Cluster: Leucine Rich Repeat family protein; n=1... 33 5.6
UniRef50_UPI0000F2DC48 Cluster: PREDICTED: hypothetical protein;... 32 9.8
UniRef50_Q1H4Z6 Cluster: Transcriptional regulator, TetR family;... 32 9.8
>UniRef50_Q4PMN9 Cluster: Salivary selenoprotein M; n=1; Ixodes
scapularis|Rep: Salivary selenoprotein M - Ixodes
scapularis (Black-legged tick) (Deer tick)
Length = 129
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/48 (58%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +2
Query: 107 VIFCAVFVLSSECELSD--IVSARIESCRGCSLNRLPEVKRFVMDDAP 244
V+ CA FV + E E +D IV AR+ESC GC LN PEVK+FV DD P
Sbjct: 9 VLLCASFVSADEKEPADKVIVKARVESCGGCRLNAYPEVKKFVYDDIP 56
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 253 SVEVKFISGAPPELILLGEGDHELERLPLSHLNQEQCNELIQSKGFSNNKK 405
+VE K I GA PE++ L D E+ER L ++++CN+L+ +GF K+
Sbjct: 60 NVEFKVIGGAKPEVLFLNMNDEEVERHSLEGRSRDECNQLLLDRGFEKKKQ 110
>UniRef50_UPI00015B4977 Cluster: PREDICTED: similar to selenoprotein
M; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
selenoprotein M - Nasonia vitripennis
Length = 117
Score = 56.4 bits (130), Expect = 4e-07
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +1
Query: 253 SVEVKFISGAPPELILLGEGDHELERLPLSHLNQEQCNELIQSKGFSNNK 402
+ E K I GAPPEL+L + E+ERL + L +E+CNEL+ KGF +K
Sbjct: 62 NAEFKHIQGAPPELVLYDHAEKEIERLQIGLLTREECNELMYEKGFKKSK 111
Score = 50.0 bits (114), Expect = 3e-05
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 167 ARIESCRGCSLNRLPEVKRFVMDDAPNYD 253
A +ESCRGC LNRLP+VK F+++D P YD
Sbjct: 33 AVVESCRGCQLNRLPDVKAFILEDVPLYD 61
>UniRef50_UPI0000D56FD2 Cluster: PREDICTED: similar to Selenoprotein
M precursor (Protein SelM); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Selenoprotein M
precursor (Protein SelM) - Tribolium castaneum
Length = 112
Score = 55.6 bits (128), Expect = 7e-07
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 MKITLLSVVIFCAVFVLSSECEL---SDIVSARIESCRGCSLNRLPEVKRFVMDDAPNYD 253
MKI S+++ C F+ + E S I AR+ESC C LNRLPEVK F+ +D P YD
Sbjct: 1 MKICA-SLLVSCVAFLALASAEAANDSKIARARVESCPSCKLNRLPEVKAFIYEDLPKYD 59
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 253 SVEVKFISGAPPELILLGEGDHELERLPLSHLNQEQCNELIQSKGFSNNKK 405
+ E K I GAPP L+ L + D +E+ L ++++CN L++SKGF+ K
Sbjct: 60 NTEFKKIQGAPPVLLFLNDADEIVEQHSLEKFSRQECNNLLKSKGFNIKNK 110
>UniRef50_A5J2A1 Cluster: Selenoprotein M; n=1; Litopenaeus
vannamei|Rep: Selenoprotein M - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 131
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1
Query: 253 SVEVKFISGAPPELILLGEGDHELERLPLSHLNQEQCNELIQSKGF 390
+ + K I GAPPEL+LL D +ERLPL L++E+CN+L+ KGF
Sbjct: 61 NAKFKQIGGAPPELVLLNRFDQVVERLPLDKLSREECNKLMLKKGF 106
Score = 52.4 bits (120), Expect = 7e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +2
Query: 83 MKITLLSVVIFCAVFVLSSECELSDIVSARIESCRGCSLNRLPEVKRFVMDDAPNYDLSK 262
+++ LL +F + L+ E + I AR+ESC GC LNRLPEVK+F+ +D P + +K
Sbjct: 6 VQLLLLLGAVFS--YTLAEELRETAIAKARVESCGGCRLNRLPEVKKFIHEDIPLFHNAK 63
>UniRef50_UPI00005A4A0E Cluster: PREDICTED: similar to selenoprotein
M precursor; n=3; Laurasiatheria|Rep: PREDICTED: similar
to selenoprotein M precursor - Canis familiaris
Length = 74
Score = 53.2 bits (122), Expect = 4e-06
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = +1
Query: 262 VKFISGAPPELILLGEGDHELERLPLSHLNQEQCNELIQSKGFSNNKKSD 411
+K + GA PEL+LLG ELER+PLS + +E+ NEL+Q GF D
Sbjct: 1 MKHLPGADPELVLLGHHYEELERIPLSEMTREEINELVQELGFYRKAAPD 50
>UniRef50_UPI0000D9C91D Cluster: PREDICTED: similar to selenoprotein
M precursor; n=1; Macaca mulatta|Rep: PREDICTED: similar
to selenoprotein M precursor - Macaca mulatta
Length = 119
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +1
Query: 262 VKFISGAPPELILLGEGDHELERLPLSHLNQEQCNELIQSKGFSNNKKSD 411
+K + GA PEL+LLG ELER+PLS + +E+ N L+Q GF D
Sbjct: 46 MKHLPGADPELVLLGRRYEELERIPLSEMTREEINALVQELGFYRKAAPD 95
>UniRef50_Q8WWX9 Cluster: Thioredoxin-like selenoprotein M
precursor; n=15; Euteleostomi|Rep: Thioredoxin-like
selenoprotein M precursor - Homo sapiens (Human)
Length = 145
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +1
Query: 262 VKFISGAPPELILLGEGDHELERLPLSHLNQEQCNELIQSKGFSNNKKSD 411
+K + GA PEL+LLG ELER+PLS + +E+ N L+Q GF D
Sbjct: 72 MKHLPGADPELVLLGRRYEELERIPLSEMTREEINALVQELGFYRKAAPD 121
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 149 LSDIVSARIESCRGCSLNRLPEVKRFVMDDAPNY 250
LS + AR+E+C GC LNRL EVK FV D P Y
Sbjct: 34 LSGLTRARVETCGGCQLNRLKEVKAFVTQDIPFY 67
>UniRef50_Q4A3I8 Cluster: Selenoprotein M; n=1; Suberites
domuncula|Rep: Selenoprotein M - Suberites domuncula
(Sponge)
Length = 123
Score = 49.2 bits (112), Expect = 6e-05
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +2
Query: 98 LSVVIFCAVFVLSSECELSDIVSARIESCRGCSLNRLPEVKRFVMDDAPNY 250
+ V + +S + +I AR+ESC GC LN LP+VKRF+ D P+Y
Sbjct: 1 MKVAVLFLTLCVSLAIGVGEIKKARLESCSGCRLNSLPKVKRFINDHLPDY 51
>UniRef50_Q8H6T5 Cluster: Selenoprotein SelM2; n=1; Chlamydomonas
reinhardtii|Rep: Selenoprotein SelM2 - Chlamydomonas
reinhardtii
Length = 138
Score = 41.5 bits (93), Expect = 0.012
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 253 SVEVKFISGAPPELILLGEGDHELERLPLSHLNQEQCNELIQSKGF 390
++ V F+ G PEL+L E E+ER+ + L ++ + L+QSKGF
Sbjct: 57 NLTVNFVPGRTPELVLYDENGVEIERMFVDKLKYDELHTLVQSKGF 102
Score = 34.3 bits (75), Expect = 1.8
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 179 SCRGCSLNRLPEVKRFVMDD 238
SC GC LN LPEVK+F+ D
Sbjct: 29 SCPGCRLNHLPEVKKFIRGD 48
>UniRef50_A0C174 Cluster: Chromosome undetermined scaffold_141,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_141,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1212
Score = 37.1 bits (82), Expect = 0.26
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 326 RDYLYLISIRNSAMNLYRAKDSQIIKNLTYKLLSVYGTVHSAHRNRYL---CFIQMSQIL 496
RD+++LI I + +Y+ DSQ++KN+ L + + + YL C + Q
Sbjct: 489 RDFMHLIIIYEYQIEIYKISDSQVVKNIRSSALRIISAIQLKYFVNYLIEDCSVMSIQFF 548
Query: 497 NNNYL 511
N +L
Sbjct: 549 QNWFL 553
>UniRef50_A2EF91 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 448
Score = 33.9 bits (74), Expect = 2.4
Identities = 28/100 (28%), Positives = 51/100 (51%)
Frame = +2
Query: 134 SSECELSDIVSARIESCRGCSLNRLPEVKRFVMDDAPNYDLSK*NSFLALHQS*SSLERE 313
S ++ ++ + IES G L +LP +++F+ ++A +S F A+ S R+
Sbjct: 35 SKTIKVLNLSYSTIESLEG--LRKLPNIEKFIANNAA---ISSLKGFEAISNIRSIELRD 89
Query: 314 TMSSRDYLYLISIRNSAMNLYRAKDSQIIKNLTYKLLSVY 433
T S++ Y +SI + MN+ R D++ I + YK Y
Sbjct: 90 TPLSKEKYYKLSIVFAFMNI-RTIDNKKIPDSLYKKAETY 128
>UniRef50_Q8H6T0 Cluster: Selenoprotein SelM1; n=1; Chlamydomonas
reinhardtii|Rep: Selenoprotein SelM1 - Chlamydomonas
reinhardtii
Length = 140
Score = 33.1 bits (72), Expect = 4.3
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 179 SCRGCSLNRLPEVKRFVMD 235
SC GC L LPEVKRF+ D
Sbjct: 42 SCSGCRLKHLPEVKRFLYD 60
>UniRef50_UPI00006CB2D2 Cluster: hypothetical protein
TTHERM_00455190; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00455190 - Tetrahymena
thermophila SB210
Length = 2746
Score = 32.7 bits (71), Expect = 5.6
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -3
Query: 153 DNSHSEDKTKTAQNITTDKSVIFILNKNLHLSN*TTN 43
+N+H + + +T QN +K +IF +NK L+L N + N
Sbjct: 546 NNNHQQKQIETFQNNQVNKPIIFEINKQLNLINASEN 582
>UniRef50_Q7RRG3 Cluster: Putative uncharacterized protein PY00758;
n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00758 - Plasmodium yoelii yoelii
Length = 1258
Score = 32.7 bits (71), Expect = 5.6
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 212 EVKRFVMDDAPNYDLSK*NSFLALHQS*SSLERETMSSRDYLYLISIRNSAMNLYR-AKD 388
E+ +F+ +D P LSK N F+ ++ E + S + L+S++ + LY+ A++
Sbjct: 1135 EILKFLKEDPPQVILSKDNKFV---ENFDFFESSLICSLTVIKLVSLKLNIRKLYKLARN 1191
Query: 389 SQIIKNLTYK 418
S +I + TY+
Sbjct: 1192 SMLIDSETYQ 1201
>UniRef50_Q24E40 Cluster: Leucine Rich Repeat family protein; n=1;
Tetrahymena thermophila SB210|Rep: Leucine Rich Repeat
family protein - Tetrahymena thermophila SB210
Length = 1391
Score = 32.7 bits (71), Expect = 5.6
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = +2
Query: 407 LTYKLLSVYGT---VHSAHRNRYLCFIQMSQILNNNYLR 514
+TYK+LSV+G + +N + F+Q ++I +NNY++
Sbjct: 1020 ITYKMLSVHGMSGDIFCISQNPFSQFVQATEIFDNNYIK 1058
>UniRef50_UPI0000F2DC48 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 712
Score = 31.9 bits (69), Expect = 9.8
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +1
Query: 154 GHCI-----RPN*ELSRVLIESSSRSKTICDG*RS*LRSVEVKFISGAPPELILLGEG-D 315
GHC+ +P+ ++ L S ++ I + LR V+VK PP+ +L+G +
Sbjct: 213 GHCVMDELVKPDNKILNYLTRFSGITRKILKPVTTRLRDVQVKLKKLLPPDAVLVGHSLN 272
Query: 316 HELERLPLSHLN 351
+L+ L + HLN
Sbjct: 273 ADLKALQMIHLN 284
>UniRef50_Q1H4Z6 Cluster: Transcriptional regulator, TetR family;
n=1; Methylobacillus flagellatus KT|Rep: Transcriptional
regulator, TetR family - Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875)
Length = 233
Score = 31.9 bits (69), Expect = 9.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 88 DHTFISCNILCSFRFIFGM*IIGHCIRP 171
DH +S LCSF F+ ++GHC+ P
Sbjct: 180 DHCLLSIFSLCSFPFMADPRVLGHCVSP 207
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,959,166
Number of Sequences: 1657284
Number of extensions: 9675706
Number of successful extensions: 22928
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 22280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22919
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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