Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40136
         (542 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23510-14|AAO38611.1|  199|Caenorhabditis elegans Hypothetical p...    30   0.94 
U23510-13|AAK71392.2|  425|Caenorhabditis elegans Hypothetical p...    30   0.94 
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF067943-1|AAC17662.2|  322|Caenorhabditis elegans Serpentine re...    28   5.0  
Z81479-10|CAB03945.2|  324|Caenorhabditis elegans Hypothetical p...    27   6.6  
U64858-6|AAB18283.2|  392|Caenorhabditis elegans Hypothetical pr...    27   6.6  
AY552606-1|AAS89253.1|  324|Caenorhabditis elegans heparan sulfa...    27   6.6  
AL031620-4|CAA20925.1|  456|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U23510-14|AAO38611.1|  199|Caenorhabditis elegans Hypothetical
           protein R12C12.8b protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 0.94
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 100 ISCNILCSFRFIFGM*IIGHCIRPN*ELSRVLIESSSRS 216
           +SC+ LC +  ++   IIG+C   N  L R ++  +SRS
Sbjct: 132 LSCSSLCQYHNVWRTRIIGNCCIVNQMLDRTMMIGASRS 170


>U23510-13|AAK71392.2|  425|Caenorhabditis elegans Hypothetical
           protein R12C12.8a protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 0.94
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 100 ISCNILCSFRFIFGM*IIGHCIRPN*ELSRVLIESSSRS 216
           +SC+ LC +  ++   IIG+C   N  L R ++  +SRS
Sbjct: 358 LSCSSLCQYHNVWRTRIIGNCCIVNQMLDRTMMIGASRS 396


>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
           protein F42C5.10 protein.
          Length = 1292

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 117 VQFSFYLRNVNYRTLYPPELRVVEGAH 197
           V  S Y R  +++T +PPE+ + EG H
Sbjct: 335 VYSSTYERKYDFKTTFPPEIEMPEGYH 361


>AF067943-1|AAC17662.2|  322|Caenorhabditis elegans Serpentine
           receptor, class x protein93 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 542 NIYNFIQVITEDNCCLIFVTFV*NISTYFYER 447
           NI NFIQ I  D+  LI +TF   +S++   R
Sbjct: 227 NILNFIQTILLDSLYLIDITFTFELSSWSTRR 258


>Z81479-10|CAB03945.2|  324|Caenorhabditis elegans Hypothetical
           protein C34F6.4 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 200 NRLPEVKRFVMDDAPNYDLSK*NSFLALHQS*SSLERETMSSRD-YLYLISI 352
           NR+P+       +A  YDL K N F  LH +  +  R+ MS  D Y ++ +I
Sbjct: 45  NRIPKTGSTTFTNAIAYDLYKENGFSVLHVN-MTKNRQVMSLPDQYTFVNNI 95


>U64858-6|AAB18283.2|  392|Caenorhabditis elegans Hypothetical
           protein C16D9.5 protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +2

Query: 344 ISIRNSAM--NLYRAKDSQIIKNLTYKLLSVYGTVHSAHRNRYLCFIQMSQILNNN 505
           IS++   M  NL++       K++T   +S+Y  +HS+H N    F  +     +N
Sbjct: 240 ISVKKPGMIENLFKEISENTKKSVTKVPISIYYFIHSSHSNFATLFTDLLDYFPSN 295


>AY552606-1|AAS89253.1|  324|Caenorhabditis elegans heparan sulfate
           2O-sulfotransferase protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 200 NRLPEVKRFVMDDAPNYDLSK*NSFLALHQS*SSLERETMSSRD-YLYLISI 352
           NR+P+       +A  YDL K N F  LH +  +  R+ MS  D Y ++ +I
Sbjct: 45  NRIPKTGSTTFTNAIAYDLYKENGFSVLHVN-MTKNRQVMSLPDQYTFVNNI 95


>AL031620-4|CAA20925.1|  456|Caenorhabditis elegans Hypothetical
           protein C18B12.4 protein.
          Length = 456

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +2

Query: 74  LFRMKITLLSVVIFCAVFVLSSECELSDIVSARIESCR--GCSLNRLPEVKRFVMDDAPN 247
           LFR  I  L V++FC    L + C    +   ++   R    +L ++P VK++ + D P+
Sbjct: 187 LFRYLIPFLVVIVFCFALFLITLCVRGCVERRKLNKRRLSKRNLKKIP-VKKYRLGDDPD 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,189,542
Number of Sequences: 27780
Number of extensions: 246047
Number of successful extensions: 582
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)