Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40133
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   7.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   7.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   7.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.6  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 563 SVFSFGRFIEYSKNISYEFFI 625
           +V + GRF  + KN+ Y F+I
Sbjct: 165 NVVATGRFTFHKKNLYYSFYI 185


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 275 QLIHTYYTTSFCFVL 319
           QLIH YYT  F  +L
Sbjct: 111 QLIHVYYTVVFTLLL 125


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 275 QLIHTYYTTSFCFVL 319
           QLIH YYT  F  +L
Sbjct: 111 QLIHVYYTVVFTLLL 125


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 275 QLIHTYYTTSFCFVL 319
           QLIH YYT  F  +L
Sbjct: 431 QLIHVYYTVVFTLLL 445


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +2

Query: 47  ASAECLFTPPALIISYSTKCIYFVHAAKNTVLKKYI 154
           +++  L+TP + I  Y+T  +   + + ++V   YI
Sbjct: 32  STSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYI 67


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +2

Query: 47  ASAECLFTPPALIISYSTKCIYFVHAAKNTVLKKYI 154
           +++  L+TP + I  Y+T  +   + + ++V   YI
Sbjct: 32  STSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYI 67


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 762 HYPVNFGGMAVKTFKKXSLNQVF 830
           H    + G+  +TFK   LN++F
Sbjct: 52  HLIYGYAGINAETFKAQPLNELF 74


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 370 LFLP*RVVTVHDKYYSKQNKTKRSSIISV 284
           +FL   V+TV    Y   NK   SS ISV
Sbjct: 122 IFLVCNVLTVFKIRYKDLNKALESSKISV 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,648
Number of Sequences: 336
Number of extensions: 3691
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)