Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40132
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    25   0.79 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   1.8  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    24   1.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   4.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   5.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   7.4  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   9.7  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   9.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.7  

>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 11/47 (23%), Positives = 24/47 (51%)
 Frame = +1

Query: 559 PEPVLGAIVKQNGKQVSGEISVSPGTPLSMGDIPEQRVGQRLWPSGD 699
           P P++  ++ +  K  SG+ ++  GT + +G     R   + +P+ D
Sbjct: 61  PVPIITRVINEEVKLASGDYTLPVGTTVGIGQFLVHR-NPKYFPNPD 106


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +2

Query: 551 GRHQSRSWEPSSSKT-ESRYRARSRSVQAR--RCPWEIFLNNESASV 682
           G   S  + P++  T E  YR R R + A    CP E+ ++N + SV
Sbjct: 259 GADNSTVFVPTARFTVEQGYRYRFRVINAGFLNCPIEVSIDNHTLSV 305


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 241 YVIRHFNLYLCGHVVQNL*NKYIFGTLQSNVQKYTIDEY 125
           + + H + YLC H++      Y F  LQ++     +DEY
Sbjct: 43  FTVDHIDPYLCTHII------YSFVGLQADGNVRHLDEY 75


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = -1

Query: 671 TRCSGISPMDNGVPGLTEISPDTCFPFCLTMAPKTGSGAFPSS*RVMFSTLGSSSRKGML 492
           T  S  SP     P L + SP+   P    +   TGS + P+     ++   +SS    +
Sbjct: 167 TSSSASSPSVTAAPHLRD-SPNYIKP---QLHVSTGSTSSPTIASATYTNSANSS----I 218

Query: 491 WSPSSLD 471
           WSP+S+D
Sbjct: 219 WSPASID 225


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +1

Query: 559 PEPVLGAIVKQNGKQVSGEISVSPGTPLSMGDIPEQRVGQRLWPSGD 699
           P P++   + Q+ K  SG+ +V  G  + +G     R+ +  +P+ D
Sbjct: 61  PVPIIARQLNQDLKLASGDYTVPAGCTVVIGTFKVHRL-EEYYPNPD 106


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 586 KQNGKQVSGEISVSPGTPLSMGDIPEQRV 672
           K++   ++ ++SVSP TP +    PE+R+
Sbjct: 81  KRSSPILAEKVSVSPTTPPTPSPPPEERL 109


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 509 SRKGMLWSPSS 477
           SRKG+ WSP++
Sbjct: 102 SRKGLFWSPAA 112


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 843 PGNLESSGISPSACPRRVVT 784
           P  +++S  SP+A PR V T
Sbjct: 201 PTKVKASKASPAAAPRSVAT 220


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 202 VVQNL*NKYIFGTLQSNVQKYTI 134
           ++  L N Y    L++NVQ Y++
Sbjct: 323 ILHELRNNYFHMDLENNVQSYSL 345


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 460 EAPQSNEEGLQSIPFRLDEPNVLNITRYEEGKAPEPVLGAIVKQNG 597
           E+     + L+  P +L +P+VL     +EG         +VK NG
Sbjct: 69  ESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHNG 114


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 460 EAPQSNEEGLQSIPFRLDEPNVLNITRYEEGKAPEPVLGAIVKQNG 597
           E+     + L+  P +L +P+VL     +EG         +VK NG
Sbjct: 69  ESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHNG 114


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 780 TSSPPDGDTLTAKFQSFPSSRVT 848
           T+S     TLT KF + PS++ T
Sbjct: 164 TTSTTTRTTLTTKFTTKPSTKPT 186


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 238 VIRHFNLYLCGHVVQNL*NKYIFGTLQSNVQKYTI 134
           VI  F LY   HV QN+  + I   L+   +++ I
Sbjct: 259 VIVIFELYYLSHVCQNVSTEVIGNILRLMHRRFEI 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,916
Number of Sequences: 336
Number of extensions: 5176
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)