Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40132
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249...    29   3.8  
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98...    29   5.0  
01_05_0290 - 20487105-20487113,20487171-20487213,20488336-204884...    29   5.0  
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054...    29   6.6  
06_03_1176 - 28172230-28172547,28172691-28172849,28172962-28174194     28   8.7  

>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
            27125387-27125656,27126027-27126377,27126480-27126757,
            27126887-27128330
          Length = 1398

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 548  KGRHQSRSWEPSSSKTESRYRARSRS 625
            + R +SRSW  S S++ S  R+RSRS
Sbjct: 1250 RSRSRSRSWSRSRSRSRSPSRSRSRS 1275



 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 548  KGRHQSRSWEPSSSKTESRYRARSRS 625
            + R +SRSW  S S++ S  R+RSRS
Sbjct: 1240 RSRSRSRSWSRSRSRSRSWSRSRSRS 1265


>05_01_0148 -
           985745-986180,986290-986385,986498-986694,986824-986919,
           987020-987059,987751-987857
          Length = 323

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +2

Query: 545 KKGRHQSRSWEPSSSKTESRYRARSRSV 628
           ++GR +SRS+  S S++ S  R+RSRS+
Sbjct: 159 RRGRGRSRSYSRSRSRSRSYSRSRSRSL 186


>01_05_0290 -
           20487105-20487113,20487171-20487213,20488336-20488412,
           20489096-20489163,20489266-20489456,20490687-20490798,
           20490892-20490943,20491984-20492076,20493065-20493211,
           20493381-20493410,20493764-20493862,20495188-20495322,
           20495420-20495498,20495989-20496064,20496345-20496423,
           20496513-20496547,20497185-20497259,20497405-20497804
          Length = 599

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 625 SPGTPLSMGDIPEQRVGQRLWPSGDYM 705
           SP TP +   +P  R+ ++ W SGDY+
Sbjct: 96  SPSTPSTKVALPAPRLCRQFWKSGDYV 122


>05_04_0028 +
           17302359-17302445,17303887-17303952,17305415-17305489,
           17305638-17305737,17305819-17305865,17305937-17305994,
           17306161-17306210,17306417-17306473,17306561-17306703,
           17306793-17306834,17307083-17307124,17308239-17308272,
           17308342-17308443,17310373-17310652,17311202-17311332,
           17311676-17311773,17312525-17312717
          Length = 534

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 548 KGRHQSRSWEPSSSKTESRYRARSRSVQARRCP 646
           +GR  SRS   S S++ S  R+RSRS    R P
Sbjct: 195 RGRSHSRSISRSRSRSRSISRSRSRSYSRSRSP 227


>06_03_1176 - 28172230-28172547,28172691-28172849,28172962-28174194
          Length = 569

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 720 RGTAGNGNLNGCSVARIWLRTSSPPDGDTLTAKFQSFPSSRVTTYG--SSFK 869
           R TAG  +L     +  +L + S PD D+L   F  FP S+ TT G  +SFK
Sbjct: 342 RLTAGK-HLRSFRYSGNFLTSLSLPDNDSLADLFIGFPRSQSTTPGPENSFK 392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,098,308
Number of Sequences: 37544
Number of extensions: 585331
Number of successful extensions: 1523
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1518
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)