Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40131
(877 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 25 0.59
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 25 0.59
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 23 2.4
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 5.5
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 5.5
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 22 5.5
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 22 5.5
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 7.3
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 21 9.6
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 25.4 bits (53), Expect = 0.59
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 24 LHLVLSVRGGGQLFNK 71
LHLVL +RGG Q+F K
Sbjct: 67 LHLVLRLRGGMQIFVK 82
Score = 25.4 bits (53), Expect = 0.59
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 24 LHLVLSVRGGGQLFNK 71
LHLVL +RGG Q+F K
Sbjct: 143 LHLVLRLRGGMQIFVK 158
Score = 25.4 bits (53), Expect = 0.59
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 24 LHLVLSVRGGGQLFNK 71
LHLVL +RGG Q+F K
Sbjct: 219 LHLVLRLRGGMQIFVK 234
Score = 25.4 bits (53), Expect = 0.59
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 24 LHLVLSVRGGGQLFNK 71
LHLVL +RGG Q+F K
Sbjct: 295 LHLVLRLRGGMQIFVK 310
Score = 25.4 bits (53), Expect = 0.59
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 24 LHLVLSVRGGGQLFNK 71
LHLVL +RGG Q+F K
Sbjct: 371 LHLVLRLRGGMQIFVK 386
Score = 25.4 bits (53), Expect = 0.59
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 24 LHLVLSVRGGGQLFNK 71
LHLVL +RGG Q+F K
Sbjct: 447 LHLVLRLRGGMQIFVK 462
Score = 25.4 bits (53), Expect = 0.59
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 24 LHLVLSVRGGGQLFNK 71
LHLVL +RGG Q+F K
Sbjct: 523 LHLVLRLRGGMQIFVK 538
Score = 25.4 bits (53), Expect = 0.59
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 24 LHLVLSVRGGGQLFNK 71
LHLVL +RGG Q+F K
Sbjct: 599 LHLVLRLRGGMQIFVK 614
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 25.4 bits (53), Expect = 0.59
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 24 LHLVLSVRGGGQLFNK 71
LHLVL +RGG Q+F K
Sbjct: 39 LHLVLRLRGGMQIFVK 54
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 373 SLLVSLPLQIKHLLTWREVLKKLLYQLPVLMPPCLLWV 486
S L L ++KH+L W+ + ++ L LLW+
Sbjct: 109 SKLHKLDNKLKHMLIWKSYKRTQIFITCELFFVILLWI 146
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 689 VLNQNIIPGLYWVLPKAVG 745
V+N + PG YW+ + +G
Sbjct: 396 VINADQTPGAYWIQLRGLG 414
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 689 VLNQNIIPGLYWVLPKAVG 745
V+N + PG YW+ + +G
Sbjct: 396 VINADQTPGAYWIQLRGLG 414
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 476 KHGGISTGS*YNNFFSTSLQVSRCFICSGKD 384
KH I FF S++ +R ++C KD
Sbjct: 48 KHYNIFACDGCAGFFKRSIRRNRQYVCKAKD 78
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 476 KHGGISTGS*YNNFFSTSLQVSRCFICSGKD 384
KH I FF S++ +R ++C KD
Sbjct: 48 KHYNIFACDGCAGFFKRSIRRNRQYVCKAKD 78
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 832 VQPTDTISQPGTRNAKSSPLAN*EQ 758
V P S PG+ +KS P+A E+
Sbjct: 1111 VPPPSGSSGPGSTGSKSPPVAGFEE 1135
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -2
Query: 699 WLSTTGHHAIIFP 661
W TGHH+ ++P
Sbjct: 213 WDGVTGHHSGLYP 225
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,959
Number of Sequences: 336
Number of extensions: 5215
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -