Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40131
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 151 9e-37
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 148 5e-36
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 129 2e-30
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 115 4e-26
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 113 2e-25
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 88 8e-18
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 78 1e-14
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 33 0.30
09_03_0187 - 13253787-13254509 33 0.40
08_01_0945 + 9376997-9377818,9378065-9378373,9379510-9379800,938... 31 1.6
12_02_1271 + 27472457-27473030,27473122-27473197,27473277-274733... 30 2.1
07_03_1666 + 28482262-28482385,28482475-28482992 29 4.9
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093... 29 4.9
12_01_0935 - 9277421-9277584,9277908-9278111,9280742-9280982,928... 28 8.5
04_01_0226 + 2842897-2842921,2843049-2843155,2843426-2843494,285... 28 8.5
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 151 bits (365), Expect = 9e-37
Identities = 90/187 (48%), Positives = 112/187 (59%), Gaps = 1/187 (0%)
Frame = +3
Query: 246 PF*GSVEV-QDGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLE 422
PF GS++V D L +NG K+ + S+RDP IPWG GAEYVVES+GVFTTT+KASAHL+
Sbjct: 190 PFKGSIKVVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLK 249
Query: 423 GGAKKVIISAPSADAPMFVVGVNLEAYDPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEG 602
GGAKKV+ISAPSADAPMFVVGVN ++YDP + L L ++ + EG
Sbjct: 250 GGAKKVVISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEG 309
Query: 603 LMTTVHGHNCYTENCWMDLLGKLWRDGPWCSTKTSFLASTGCCQKQLGKGYPCS*LASGL 782
LMTTVH T+ K WR G + + +STG K +GK P
Sbjct: 310 LMTTVHATTA-TQKTVDGPSMKDWRGGRG-AAQNIIPSSTGAA-KAVGKVLP-ELNGKLT 365
Query: 783 DLAFRVP 803
+AFRVP
Sbjct: 366 GMAFRVP 372
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 97 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKAVLRFR 273
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+FKYDSTHG FK ++
Sbjct: 139 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVV 198
Query: 274 MDSLL 288
DS L
Sbjct: 199 DDSTL 203
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 148 bits (359), Expect = 5e-36
Identities = 92/188 (48%), Positives = 114/188 (60%), Gaps = 2/188 (1%)
Frame = +3
Query: 246 PF*GSVEVQD-GFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLE 422
PF G+++V D L +NG KI+V S+RDP IPWG GAEYVVES+GVFTTT+KASAHL+
Sbjct: 131 PFKGTIKVVDESTLEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLK 190
Query: 423 GGAKKVIISAPSADAPMFVVGVNLEAYDPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEG 602
GGA+KV+ISAPSADAPMFVVGVN + Y+P + L L ++ + EG
Sbjct: 191 GGARKVVISAPSADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAKIVHEEFGIAEG 250
Query: 603 LMTTVHGHNCYTENCWMDLLGKLWRDGPWCSTKTSFLASTGCCQKQLGKGYPCS*LASGL 782
LMTTVH T+ K WR G S + +STG K +GK P L L
Sbjct: 251 LMTTVHATTA-TQKTVDGPSMKDWRGGRGAS-QNIIPSSTGAA-KAVGKVLPA--LNGKL 305
Query: 783 -DLAFRVP 803
+AFRVP
Sbjct: 306 TGMAFRVP 313
Score = 82.2 bits (194), Expect = 5e-16
Identities = 38/65 (58%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 97 SKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFKAVLRFR 273
+K+GINGFGRIGRLVLR + + +VVA+NDPFI YM Y+FKYDSTHG FK ++
Sbjct: 80 TKVGINGFGRIGRLVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVV 139
Query: 274 MDSLL 288
+S L
Sbjct: 140 DESTL 144
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 129 bits (312), Expect = 2e-30
Identities = 84/183 (45%), Positives = 105/183 (57%), Gaps = 2/183 (1%)
Frame = +3
Query: 261 VEVQDGFLVVNGNK-IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 437
V+V+D ++ G K + VF R+P+ IPWG+ GAE+VVESTGVFT DKA+AHL+GGAKK
Sbjct: 109 VKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKK 168
Query: 438 VIISAPSADAPMFVVGVNLEAYDPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEGLMTTV 617
V+ISAPS DAPMFVVGVN + Y P + L L ++ + EGLMTTV
Sbjct: 169 VVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 228
Query: 618 HGHNCYTENCWMDLLGKLWRDGPWCSTKTSFLASTGCCQKQLGKGYPCS*LASGL-DLAF 794
H T+ K WR G S +STG K +GK P L L +AF
Sbjct: 229 HAITA-TQKTVDGPSSKDWRGGRAASFNI-IPSSTGAA-KAVGKVLPA--LNGKLTGMAF 283
Query: 795 RVP 803
RVP
Sbjct: 284 RVP 286
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +1
Query: 100 KIGINGFGRIGRLVLRASIEK-GAQVVAINDPFIGLDYMVYLF 225
KIGINGFGRIGRLV R +++ ++VA+NDPFI DYM+ F
Sbjct: 5 KIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMICEF 47
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 115 bits (277), Expect = 4e-26
Identities = 73/162 (45%), Positives = 89/162 (54%)
Frame = +3
Query: 318 ERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLE 497
ER+P IPW +AGAEYVVESTGVFT +KA+AHL+GGAKKV+ISAPS DAPMFV GVN +
Sbjct: 104 ERNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNED 163
Query: 498 AYDPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEGLMTTVHGHNCYTENCWMDLLGKLWR 677
Y + L L ++ + EGLMTTVH T+ K WR
Sbjct: 164 KYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITA-TQKTVDGPSSKDWR 222
Query: 678 DGPWCSTKTSFLASTGCCQKQLGKGYPCS*LASGLDLAFRVP 803
G S +STG K +GK P ++FRVP
Sbjct: 223 GGRAASFNI-IPSSTGAA-KAVGKVLP-DLNGKLTGMSFRVP 261
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/53 (62%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = +1
Query: 100 KIGINGFGRIGRLVLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFK 255
KIGINGFGRIGRLV R +++ + ++VA+NDPFI DYM Y+FKYD+ HG++K
Sbjct: 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK 57
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 113 bits (272), Expect = 2e-25
Identities = 85/197 (43%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Frame = +3
Query: 261 VEVQDGFLVVNGNK-IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHL------ 419
V+V+D ++ G K +AVF R+P+ IPW AGAEYVVESTGVFT DKA+AHL
Sbjct: 66 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGQAVD 125
Query: 420 --------EGGAKKVIISAPSADAPMFVVGVNLEAYDPLLRSSQMLLAPQTVLPHLQRLF 575
+GGAKKV+ISAPS DAPMFVVGVN + Y + L L ++
Sbjct: 126 LFSIIFHMQGGAKKVVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVI 185
Query: 576 MITLKLFEGLMTTVHGHNCYTENCWMDLLGKLWRDGPWCSTKTSFLASTGCCQKQLGKGY 755
+ EGLMTTVH T+ K WR G S +STG K +GK
Sbjct: 186 NDRFGIVEGLMTTVHAITA-TQKTVDGPSMKDWRGGRAASFNI-IPSSTGAA-KAVGKVL 242
Query: 756 PCS*LASGL-DLAFRVP 803
P L L +AFRVP
Sbjct: 243 PA--LNGKLTGMAFRVP 257
Score = 65.7 bits (153), Expect = 5e-11
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 GFGRIGRLVLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFK 255
GFGRIGRLV R +++ + ++VA+NDPFI +YM Y+FKYD+ HG++K
Sbjct: 15 GFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWK 62
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 88.2 bits (209), Expect = 8e-18
Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Frame = +3
Query: 267 VQDGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVII 446
V D + V+G I V S+R+P +PWG+ G + V+E TGVF D A H++ GAKKV+I
Sbjct: 128 VGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLI 187
Query: 447 SAP-SADAPMFVVGVNLEAYDPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEGLMTTVHG 623
+AP D P +VVGVN + Y P L ++ + +G MTT H
Sbjct: 188 TAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMTTTHS 247
Query: 624 H 626
+
Sbjct: 248 Y 248
Score = 44.0 bits (99), Expect = 2e-04
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +1
Query: 100 KIGINGFGRIGRLVLRASIEKG----AQVVAINDPFIGLDYMVYLFKYDSTHGRFKA 258
K+ INGFGRIGR LR +G V+AIND G+ +L KYDST G F A
Sbjct: 68 KVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDA 123
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 77.8 bits (183), Expect = 1e-14
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Frame = +3
Query: 267 VQDGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVII 446
V D + V+G I V S RDP +PW + G + V+E TGVF A H++ GAKKVII
Sbjct: 138 VDDQTISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 197
Query: 447 SAPS--ADAPMFVVGVNLEAYDPLLRS--SQMLLAPQTVLPHLQRLFMITLKLFEGLMTT 614
+AP+ AD P +V+GVN Y + + S + P + ++ + +G MTT
Sbjct: 198 TAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFV-KILDEEFGIVKGTMTT 256
Query: 615 VHGH 626
H +
Sbjct: 257 THSY 260
Score = 45.2 bits (102), Expect = 7e-05
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 85 ADNMSKIGINGFGRIGRLVLRASIEK---GAQVVAINDPFIGLDYMVYLFKYDSTHGRFK 255
A+ K+ INGFGRIGR LR E+ +VV +ND G+ +L KYDS G FK
Sbjct: 74 AEAKLKVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSG-GVRNASHLLKYDSMLGTFK 132
Query: 256 AVLRFRMDSLLLTVTKL 306
A ++ D + KL
Sbjct: 133 ADVKIVDDQTISVDGKL 149
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 294 GNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDK 404
GNK+ D + + WGK E + E G+ T+T+K
Sbjct: 445 GNKVDEMKSGDRQHLWWGKRNVEQITEKLGLLTSTEK 481
>09_03_0187 - 13253787-13254509
Length = 240
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 648 WMDLLGKLWRDGPWCSTKTSFLA-STGCCQ-KQLGKGYPCS*LASGLDLAFRVPG 806
W+ LG+++ D WC +T++LA +G + + G G P +A FRV G
Sbjct: 28 WITSLGRVFDDTRWCGQRTAYLADGSGAAEARTTGSGAPKLGMAGFATSEFRVFG 82
>08_01_0945 +
9376997-9377818,9378065-9378373,9379510-9379800,
9380060-9380173,9380280-9380981
Length = 745
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 244 GRFKAVLRFRMDSLLLTVTKLPFSQKGTLRPFHGEKLGLNML*SLLVSLPLQIKHL 411
GR +A+LRF LLL++ L F L+ +H + + L LP ++HL
Sbjct: 105 GRGRAMLRFLRGFLLLSLAMLAFETVAHLKGWHFPRSAAGLPEKYLRRLPEHLQHL 160
>12_02_1271 +
27472457-27473030,27473122-27473197,27473277-27473392,
27473840-27474354
Length = 426
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 722 WVLPKAVG*GLSLLLIGKRTGFGIPRP 802
W+LP A+G LSLLL+ T F +P P
Sbjct: 17 WLLPLAIGSALSLLLLVLLTTFPLPFP 43
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 490 LTPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPVDSTTYSAPAFPHG 338
+T + MG+ G+ + + PP + S+ TT AP PHG
Sbjct: 81 VTSSEMMGSLMSGSGRVAVITPPPAASGGASLPAAAAAGGTTLVAPVVPHG 131
>04_04_0678 +
27207340-27207447,27207555-27207668,27209111-27209332,
27209407-27209481,27209569-27209685,27210145-27210395,
27210686-27210761,27210862-27210948,27211037-27211222
Length = 411
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 109 INGFGRIGRLVLRASIEKGAQVVAIND 189
I GFG +G R EKG +V+A+ D
Sbjct: 211 IQGFGNVGSWAARIIHEKGGKVIALGD 237
>12_01_0935 -
9277421-9277584,9277908-9278111,9280742-9280982,
9282165-9282494
Length = 312
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 109 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLD 207
+ G G IGR ++ AS+ +G + P IGLD
Sbjct: 9 VGGTGYIGRRIVAASLAEGHPTFVLLRPEIGLD 41
>04_01_0226 +
2842897-2842921,2843049-2843155,2843426-2843494,
2850676-2852745
Length = 756
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 718 LLGAAKSSW-VRVIPALNWQADWIWHSASXVG*WYPL 825
LL A SSW + + A W W+ H A VG WY L
Sbjct: 365 LLSALGSSWTLSFLCARRWS--WLQHVALCVGRWYQL 399
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,613,413
Number of Sequences: 37544
Number of extensions: 612900
Number of successful extensions: 1654
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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