Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40131
(877 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 136 1e-32
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 132 2e-31
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 123 1e-28
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 121 6e-28
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 86 3e-17
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 82 4e-16
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 75 8e-14
At4g01330.1 68417.m00173 protein kinase family protein contains ... 30 2.3
At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identi... 29 4.1
At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identi... 29 4.1
At2g44030.1 68415.m05474 kelch repeat-containing F-box family pr... 29 4.1
At3g03910.1 68416.m00405 glutamate dehydrogenase, putative simil... 29 5.4
At1g21440.1 68414.m02681 mutase family protein similar to carbox... 28 7.1
At4g03130.1 68417.m00426 BRCT domain-containing protein contains... 28 9.4
At1g09680.1 68414.m01087 pentatricopeptide (PPR) repeat-containi... 28 9.4
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 136 bits (330), Expect = 1e-32
Identities = 86/186 (46%), Positives = 104/186 (55%), Gaps = 1/186 (0%)
Frame = +3
Query: 249 F*GSVEV-QDGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEG 425
F GS+ V D L +NG K+ V S+RDP IPW GA+YVVES+GVFTT KA++HL+G
Sbjct: 139 FKGSINVIDDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHLKG 198
Query: 426 GAKKVIISAPSADAPMFVVGVNLEAYDPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEGL 605
GAKKVIISAPSADAPMFVVGVN Y P + L L ++ + EGL
Sbjct: 199 GAKKVIISAPSADAPMFVVGVNEHTYQPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGL 258
Query: 606 MTTVHGHNCYTENCWMDLLGKLWRDGPWCSTKTSFLASTGCCQKQLGKGYPCS*LASGLD 785
MTTVH T+ K WR G S + +STG K +GK P
Sbjct: 259 MTTVHATTA-TQKTVDGPSMKDWRGGRGAS-QNIIPSSTGAA-KAVGKVLP-ELNGKLTG 314
Query: 786 LAFRVP 803
+AFRVP
Sbjct: 315 MAFRVP 320
Score = 81.0 bits (191), Expect = 1e-15
Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +1
Query: 97 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKAVLRFR 273
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+ KYDSTHG FK +
Sbjct: 87 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKGSINVI 146
Query: 274 MDSLL 288
DS L
Sbjct: 147 DDSTL 151
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 132 bits (320), Expect = 2e-31
Identities = 82/179 (45%), Positives = 101/179 (56%)
Frame = +3
Query: 267 VQDGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVII 446
+ D L +NG ++ V S+RDP IPW GAEYVVES+GVFTT +AS+HL+GGAKKVII
Sbjct: 144 IDDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSHLKGGAKKVII 203
Query: 447 SAPSADAPMFVVGVNLEAYDPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEGLMTTVHGH 626
SAPSADAPMFVVGVN + Y P + L L ++ + EGLMTTVH
Sbjct: 204 SAPSADAPMFVVGVNEKTYLPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHAT 263
Query: 627 NCYTENCWMDLLGKLWRDGPWCSTKTSFLASTGCCQKQLGKGYPCS*LASGLDLAFRVP 803
T+ K WR G S + +STG K +GK P +AFRVP
Sbjct: 264 TA-TQKTVDGPSMKDWRGGRGAS-QNIIPSSTGAA-KAVGKVLP-ELNGKLTGMAFRVP 318
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +1
Query: 97 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKAVLRFR 273
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+FKYDSTHG +K +
Sbjct: 85 TKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGNYKGTINVI 144
Query: 274 MDSLL 288
DS L
Sbjct: 145 DDSTL 149
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 123 bits (297), Expect = 1e-28
Identities = 81/182 (44%), Positives = 103/182 (56%), Gaps = 1/182 (0%)
Frame = +3
Query: 261 VEVQDGFLVVNGNK-IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 437
++V+D ++ G K + VF R+P+ IPWG+AGA++VVESTGVFT DKA+AHL+GGAKK
Sbjct: 63 LKVKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKK 122
Query: 438 VIISAPSADAPMFVVGVNLEAYDPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEGLMTTV 617
V+ISAPS DAPMFVVGVN Y L L L ++ + EGLMTTV
Sbjct: 123 VVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 182
Query: 618 HGHNCYTENCWMDLLGKLWRDGPWCSTKTSFLASTGCCQKQLGKGYPCS*LASGLDLAFR 797
H T+ K WR G S +STG K +GK P S ++FR
Sbjct: 183 HSITA-TQKTVDGPSMKDWRGGRAASFNI-IPSSTGAA-KAVGKVLP-SLNGKLTGMSFR 238
Query: 798 VP 803
VP
Sbjct: 239 VP 240
Score = 79.4 bits (187), Expect = 3e-15
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = +1
Query: 82 LADNMSKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFK- 255
+AD +IGINGFGRIGRLV R +++ ++VA+NDPFI +YM Y+FKYDS HG++K
Sbjct: 1 MADKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKH 60
Query: 256 AVLRFRMDSLLL 291
L+ + D LL
Sbjct: 61 HELKVKDDKTLL 72
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 121 bits (292), Expect = 6e-28
Identities = 81/183 (44%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Frame = +3
Query: 261 VEVQDGFLVVNGNK-IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 437
++++D ++ G K + VF R+P+ IPW +AGA+YVVESTGVFT DKA+AHL+GGAKK
Sbjct: 63 LKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKK 122
Query: 438 VIISAPSADAPMFVVGVNLEAYDPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEGLMTTV 617
V+ISAPS DAPMFVVGVN Y L L L ++ + EGLMTTV
Sbjct: 123 VVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 182
Query: 618 HGHNCYTENCWMDLLGKLWRDGPWCSTKTSFLASTGCCQKQLGKGYPCS*LASGL-DLAF 794
H T+ K WR G S +STG K +GK P L L ++F
Sbjct: 183 HSITA-TQKTVDGPSMKDWRGGRAASFNI-IPSSTGAA-KAVGKVLPA--LNGKLTGMSF 237
Query: 795 RVP 803
RVP
Sbjct: 238 RVP 240
Score = 78.6 bits (185), Expect = 5e-15
Identities = 34/59 (57%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 LADNMSKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFK 255
+AD +IGINGFGRIGRLV R +++ ++VA+NDPFI +YM Y+FKYDS HG++K
Sbjct: 1 MADKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWK 59
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 85.8 bits (203), Expect = 3e-17
Identities = 45/119 (37%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = +3
Query: 273 DGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISA 452
D L V+G I + S+R+P +PWG+ G + V+E TGVF D A HL+ GAKKV+I+A
Sbjct: 127 DSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITA 186
Query: 453 P-SADAPMFVVGVNLEAYDPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEGLMTTVHGH 626
P D P +VVGVN E Y L ++ + +G MTT H +
Sbjct: 187 PGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSY 245
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +1
Query: 100 KIGINGFGRIGRLVLR---ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKAVLRF 270
K+ INGFGRIGR LR + VV IND G+ +L KYDST G F A ++
Sbjct: 66 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLGIFDADVKP 124
Query: 271 RMDSLL 288
DS L
Sbjct: 125 SGDSAL 130
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 82.2 bits (194), Expect = 4e-16
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Frame = +3
Query: 288 VNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAP-SAD 464
V+G I V S R+P +PW + G + V+E TGVF + A H+E GAKKVII+AP D
Sbjct: 129 VDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGD 188
Query: 465 APMFVVGVNLEAY---DPLLRSSQMLLAPQTVLPHLQRLFMITLKLFEGLMTTVHGH 626
P +VVGVN +AY +P++ S + P ++ L + +G MTT H +
Sbjct: 189 IPTYVVGVNADAYSHDEPII--SNASCTTNCLAPFVKVLDQ-KFGIIKGTMTTTHSY 242
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 100 KIGINGFGRIGRLVLR---ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKA 258
K+ INGFGRIGR LR + ++AIND G+ +L KYDST G F A
Sbjct: 63 KVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDA 117
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 74.5 bits (175), Expect = 8e-14
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Frame = +3
Query: 249 F*GSVEVQDGFLV-VNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEG 425
F V++ D + V+G I V S RDP +PW + G + V+E TGVF A H++
Sbjct: 135 FKAEVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQA 194
Query: 426 GAKKVIISAPS--ADAPMFVVGVNLEAY-DPLLRSSQMLLAPQTVLPHLQRLFMITLKLF 596
GA KVII+AP+ AD P +V+GVN + Y + L ++ +
Sbjct: 195 GASKVIITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVLDEEFGIV 254
Query: 597 EGLMTTVHGH 626
+G MTT H +
Sbjct: 255 KGTMTTTHSY 264
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 100 KIGINGFGRIGRLVLR---ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKAVLR 267
K+ INGFGRIGR LR + +VV +ND G+ +L KYDS G FKA ++
Sbjct: 83 KVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSG-GVKNASHLLKYDSMLGTFKAEVK 140
>At4g01330.1 68417.m00173 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 329
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -2
Query: 273 PEPQHCLKTAMGGIILEKINHIVKTDERVIYSDHLSSLFNRSTEHQTANAAKS 115
P HC T + E I KT+ RV++SD +SS +R T +TA+ + S
Sbjct: 84 PAQDHCHPTQP--VAAEIQVDIGKTEHRVVFSDRVSSGESRGTVSETASYSGS 134
>At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identical
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 109 INGFGRIGRLVLRASIEKGAQVVAIND 189
I GFG +G + EKG ++VA++D
Sbjct: 211 IQGFGNVGSWAAKLISEKGGKIVAVSD 237
>At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identical
to glutamate dehydrogenase 2 (GDH 2) [Arabidopsis
thaliana] SWISS-PROT:Q38946
Length = 411
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 109 INGFGRIGRLVLRASIEKGAQVVAIND 189
I GFG +G + EKG +VVA++D
Sbjct: 211 IQGFGNVGTWAAKLIHEKGGKVVAVSD 237
>At2g44030.1 68415.m05474 kelch repeat-containing F-box family
protein low similarity to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 380
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 134 VWCSVLLLKRELKWSL*MTLSSVLTI 211
+WC+++LL+REL W + +V T+
Sbjct: 331 IWCALILLERELVWGVIEWSENVFTL 356
>At3g03910.1 68416.m00405 glutamate dehydrogenase, putative similar
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 100 KIGINGFGRIGRLVLRASIEKGAQVVAIND 189
+ I GFG +G + +KG ++VA++D
Sbjct: 208 RFAIQGFGNVGSWAAKLISDKGGKIVAVSD 237
>At1g21440.1 68414.m02681 mutase family protein similar to
carboxyvinyl-carboxyphosphonate phosphorylmutase
GB:O49290 from [Arabidopsis thaliana]; similar to
carboxyphosphonoenolpyruvate mutase (GI:47149)
[Streptomyces hygroscopicus]; contains Prosite PS00161:
Isocitrate lyase signature
Length = 336
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 348 KAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLEAY 503
+ A + TG+ D+A+ ++E GA + AP D + +G + Y
Sbjct: 191 RTDARALSAKTGLSDAIDRANLYMEAGADASFVEAPRDDDELKEIGRRTKGY 242
>At4g03130.1 68417.m00426 BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 765
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 739 CFWQHPVEARNDVLVEHHGPSRHNF 665
C W+HP R+ ++ HH P R ++
Sbjct: 439 CEWRHPRAKRSRLMQRHHVPPRRSW 463
>At1g09680.1 68414.m01087 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 607
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 589 FKVIMNNLCKWGKTVCGARSI*DD-LKRGS*ASRLTPTTNMGASALGADIITFL 431
+ ++N CK G V AR+I D ++RG ++T TT + G D+ T L
Sbjct: 383 YNTLVNGFCKNGDLV-AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETAL 435
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,025,915
Number of Sequences: 28952
Number of extensions: 478373
Number of successful extensions: 1375
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2058178400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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