Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40130
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6IE02 Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Re...    79   7e-14
UniRef50_Q17CD2 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  
UniRef50_UPI0000382784 Cluster: COG3210: Large exoproteins invol...    34   2.8  
UniRef50_UPI0000DBFFDF Cluster: UPI0000DBFFDF related cluster; n...    34   2.8  
UniRef50_Q5TUB5 Cluster: ENSANGP00000028766; n=2; Culicidae|Rep:...    34   2.8  
UniRef50_A4R6V7 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_A7IP42 Cluster: Cyclic nucleotide-binding protein; n=1;...    34   3.7  
UniRef50_A6EQI7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_Q4SPS4 Cluster: Chromosome 7 SCAF14536, whole genome sh...    33   4.9  
UniRef50_Q0M531 Cluster: Outer membrane autotransporter barrel; ...    33   6.4  
UniRef50_A6RVF8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_Q70BZ3 Cluster: Mod(Mdg4)-54.5; n=2; Drosophila melanog...    33   8.5  

>UniRef50_Q6IE02 Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Rep:
           Mod(Mdg4)-heS00531 - Bombyx mori (Silk moth)
          Length = 344

 Score = 79.4 bits (187), Expect = 7e-14
 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 KDDSNMEMTGFDGSATGDVNISGGEGGAVGDAQ-VVKVKNTHGTTLALFNGYTYYMTRRS 430
           +DDSNMEMTGFDGSATGDVNISGGEGGAVGDAQ      +  G  + ++  Y +++ ++ 
Sbjct: 248 EDDSNMEMTGFDGSATGDVNISGGEGGAVGDAQDPFFGTSCRGRPVIVYQNYRFHLHQKY 307

Query: 431 KNLSTWVCTNASRATRCKGKIMLLND 508
              ++W C    R   C+  I+   D
Sbjct: 308 GEKTSWRCAK-WRNGFCRSSIVTFED 332



 Score = 59.7 bits (138), Expect = 6e-08
 Identities = 38/69 (55%), Positives = 39/69 (56%)
 Frame = +3

Query: 3   PNRPFQLASK*TLLPHQSGPAKTKMRRSHWKARSLWFCKKTNL*RYPDEDENNAVAPKME 182
           PNRP  +AS       QSGPAK K         S     K      PDEDENNAVAPKME
Sbjct: 168 PNRP-SIASN-NSSSSQSGPAKRKCVDPLEAGPS--GSAKDEFVTIPDEDENNAVAPKME 223

Query: 183 PEFVNESMW 209
           PEFVNESMW
Sbjct: 224 PEFVNESMW 232


>UniRef50_Q17CD2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 432

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = +2

Query: 332 GAVGDAQVVKVKNTHGTTLALFNGYTYYMTRRSKNLSTWVCTNASRATRCKGKIMLLNDK 511
           G  G   + K+ N +   L  ++G+ Y  +  S+  S WVC +     +CKG+I L  DK
Sbjct: 102 GCPGGKALFKIGNRNSLKL-YYSGHFYTRSYTSEKSSKWVC-DRKNMLKCKGRIRLNRDK 159


>UniRef50_UPI0000382784 Cluster: COG3210: Large exoproteins involved
           in heme utilization or adhesion; n=1; Magnetospirillum
           magnetotacticum MS-1|Rep: COG3210: Large exoproteins
           involved in heme utilization or adhesion -
           Magnetospirillum magnetotacticum MS-1
          Length = 307

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +2

Query: 302 GDVNISGGEGGAVGDAQVVKVKNTHGTTLALFNGYTYYMTRRSKNLSTWVCTNASRATRC 481
           GD  + GG+GG    A+V+ +  T+G  LA+      ++T R+ +L      N   A   
Sbjct: 183 GDTVLEGGDGGVGSAAKVIGISLTNGANLAVRAAQDIFVTARNGDL------NLESAYSQ 236

Query: 482 KGKIMLLNDKMSL 520
            G +  ++DK S+
Sbjct: 237 GGNVTFVSDKGSI 249


>UniRef50_UPI0000DBFFDF Cluster: UPI0000DBFFDF related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBFFDF UniRef100 entry -
           Rattus norvegicus
          Length = 423

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 243 FRHCSCHLHRHP-TYSH*QTLVPFWERQHCSH 151
           ++H   H H H  T+SH  T  PFW R   SH
Sbjct: 351 YKHTHTHTHTHTLTHSHTHTHAPFWMRMRTSH 382


>UniRef50_Q5TUB5 Cluster: ENSANGP00000028766; n=2; Culicidae|Rep:
           ENSANGP00000028766 - Anopheles gambiae str. PEST
          Length = 425

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 20/67 (29%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
 Frame = +2

Query: 362 VKNTHGTTLALFNGYTYYMTRRSKNLSTWVCTNASRATRCKGKIML-LNDKMSL*RAVLN 538
           V    G  L +F GY Y + R    L  W C +     RC  K     N   S+     N
Sbjct: 340 VTTKKGKELLIFRGYVYRVNRHRGRLRYWECASRRTKIRCSSKCTTEFNTLRSISGGKHN 399

Query: 539 TPIKNLD 559
            P  NL+
Sbjct: 400 HPCANLE 406


>UniRef50_A4R6V7 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 549

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1

Query: 58  DQRKRKCVDPTGKPGPSGSAKRRICDDTQTKMRTMLSLPK 177
           D R   C DP G PGP GS  R +  D    +  +   PK
Sbjct: 283 DYRSLACADPPGPPGPPGSPSRCLSPDQMKAVEALSQGPK 322


>UniRef50_A7IP42 Cluster: Cyclic nucleotide-binding protein; n=1;
           Xanthobacter autotrophicus Py2|Rep: Cyclic
           nucleotide-binding protein - Xanthobacter sp. (strain
           Py2)
          Length = 385

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 227 AIFIVIPHT-LINKLWFHFGSDSIVLIFVWVSSQIRLFAEPEGP 99
           A+   +P   L +K WFH+G  S +LIF  V   +RL+  PE P
Sbjct: 42  AVLATVPSLQLRDKWWFHWGEFSALLIFT-VEYAVRLWVAPEHP 84


>UniRef50_A6EQI7 Cluster: Putative uncharacterized protein; n=1;
           unidentified eubacterium SCB49|Rep: Putative
           uncharacterized protein - unidentified eubacterium SCB49
          Length = 449

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 275 MTGFDGSATGDVNISGGEGGAVGDAQVVKVKNTHGTTLALFN 400
           M GFDG ++     +GG GGA G+  V+K  N    TL + N
Sbjct: 367 MGGFDGDSSTADGGNGGNGGAGGNVTVIKDPNVKKVTLKINN 408


>UniRef50_Q4SPS4 Cluster: Chromosome 7 SCAF14536, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 7 SCAF14536, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 323

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 311 NISGGEGGAVGDAQVVKVKNTHGTTLALFNG-YTYYMTRRSKNLSTWV 451
           +I GGE G VGD  +        T++++    Y+YY+ RR K++ T V
Sbjct: 211 SIEGGEDGPVGDGGIEGGVERERTSVSISGSQYSYYIRRRRKSIKTIV 258


>UniRef50_Q0M531 Cluster: Outer membrane autotransporter barrel; n=1;
            Caulobacter sp. K31|Rep: Outer membrane autotransporter
            barrel - Caulobacter sp. K31
          Length = 3046

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +2

Query: 290  GSATGDVNIS-GGEGGAVGDAQVVKVKN 370
            G   G V +S GG GGA GDA++VKVK+
Sbjct: 1209 GQTAGAVTVSVGGTGGAGGDAELVKVKS 1236


>UniRef50_A6RVF8 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 128

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = +3

Query: 42  LPHQSGPAKTKMRRSHWKARSLWFCKKTNL*RYPDEDENNAVAPKMEPE 188
           L    G A+TK RRS   ARS+W  K  N     +   N+ VA   +PE
Sbjct: 18  LSKSGGHARTKSRRSSLSARSMWSIKSGNGGESKELRANDRVATWYDPE 66


>UniRef50_Q70BZ3 Cluster: Mod(Mdg4)-54.5; n=2; Drosophila
           melanogaster|Rep: Mod(Mdg4)-54.5 - Drosophila
           melanogaster (Fruit fly)
          Length = 114

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 353 VVKVKNTHGTTLALFNGYTYYMTRRSKNLSTWVCTNASRATRCKGKIM 496
           ++ VK T G    L  GY YY      + + W+C   +R  RC  +I+
Sbjct: 25  IMIVKGTKGKPKLLMGGYEYYRNNSRGSKTYWLCAR-NRYMRCAARII 71


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,439,684
Number of Sequences: 1657284
Number of extensions: 12022675
Number of successful extensions: 31462
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 29722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31438
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)