Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40130
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.9  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    24   3.9  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      23   6.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 426 AQRT*VLGFAPTLAGRPDVKEKLC 497
           AQRT +LG A  L G     E+LC
Sbjct: 182 AQRTRILGLAGPLHGAGCTPERLC 205


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -3

Query: 183 VPFWERQHCSHLRLGIVTNSSFC 115
           +P W  Q C  + +  + N++ C
Sbjct: 348 IPIWSNQECQEVYVNRIYNTTLC 370


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 425 RSKNLSTWVCTNASRATRCKGK 490
           RS  + T  CTN + + +C+G+
Sbjct: 56  RSAMVQTLTCTNPTCSAQCRGR 77


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,460
Number of Sequences: 2352
Number of extensions: 13155
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)