Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40130
         (680 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42412-1|AAC50495.1|  331|Homo sapiens 5'-AMP-activated protein ...    30   6.6  
BT007345-1|AAP36009.1|  331|Homo sapiens protein kinase, AMP-act...    30   6.6  
BC000358-1|AAH00358.1|  331|Homo sapiens protein kinase, AMP-act...    30   6.6  
AK097606-1|BAC05117.1|  340|Homo sapiens protein ( Homo sapiens ...    30   6.6  

>U42412-1|AAC50495.1|  331|Homo sapiens 5'-AMP-activated protein
           kinase, gamma-1 subunit protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 612 ERYKTNLDFNINSVADHVSRFFMGVFKTALHKDILSFSN 496
           E+   NLD ++     H S +F GV K  LH+ + +  N
Sbjct: 252 EKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLETIIN 290


>BT007345-1|AAP36009.1|  331|Homo sapiens protein kinase,
           AMP-activated, gamma 1 non-catalytic subunit protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 612 ERYKTNLDFNINSVADHVSRFFMGVFKTALHKDILSFSN 496
           E+   NLD ++     H S +F GV K  LH+ + +  N
Sbjct: 252 EKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLETIIN 290


>BC000358-1|AAH00358.1|  331|Homo sapiens protein kinase,
           AMP-activated, gamma 1 non-catalytic subunit protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 612 ERYKTNLDFNINSVADHVSRFFMGVFKTALHKDILSFSN 496
           E+   NLD ++     H S +F GV K  LH+ + +  N
Sbjct: 252 EKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLETIIN 290


>AK097606-1|BAC05117.1|  340|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40287 fis, clone TESTI2027909, highly similar to
           5'-AMP-ACTIVATED PROTEIN KINASE, GAMMA-1 SUBUNIT. ).
          Length = 340

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 612 ERYKTNLDFNINSVADHVSRFFMGVFKTALHKDILSFSN 496
           E+   NLD ++     H S +F GV K  LH+ + +  N
Sbjct: 261 EKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLETIIN 299


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,208,683
Number of Sequences: 237096
Number of extensions: 1900162
Number of successful extensions: 3784
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3784
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)