Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40130
         (680 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g34550.1 68414.m04294 expressed protein contains Pfam profile...    30   1.6  
At5g55350.1 68418.m06897 membrane bound O-acyl transferase (MBOA...    29   3.8  
At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOA...    28   6.6  
At5g55320.1 68418.m06894 membrane bound O-acyl transferase (MBOA...    28   6.6  
At5g16350.1 68418.m01911 expressed protein                             27   8.7  

>At1g34550.1 68414.m04294 expressed protein contains Pfam profile
           PF04765: Protein of unknown function (DUF616);
           expression supported by MPSS
          Length = 812

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 257 DDSNMEMTGFDGSATGDVNISGGEGGAVGDAQVVKVKNTHG 379
           DD N +M  F  S T   ++ G  GGA  D   + ++N  G
Sbjct: 89  DDDNAKMAQFRQSGTDRFSVRGNGGGASSDHVTIGIRNGVG 129


>At5g55350.1 68418.m06897 membrane bound O-acyl transferase (MBOAT)
           family protein / wax synthase-related contains
           similarity to wax synthase  wax synthase - Simmondsia
           chinensis, PID:g5020219 similar to wax synthase
           [gi:5020219] from Simmondsia chinensis
          Length = 345

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = -1

Query: 251 VISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWVSS-QIRLFAEPEGPGFPVGSTH 75
           ++S + V  +F+V+P   ++ +  HF S S      W+++ ++ LF+  +GP FPV S  
Sbjct: 36  LLSVLPVCVLFLVLP-LFVSSV--HF-SGSTAFFLSWLANFKLILFSFDQGPLFPVPSNL 91

Query: 74  FRF 66
            RF
Sbjct: 92  SRF 94


>At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOAT)
           family protein / wax synthase-related  similar to wax
           synthase [gi:5020219] from Simmondsia chinensis
          Length = 341

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = -1

Query: 251 VISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWVSSQIRLFAEPEGPGFPVGSTHF 72
           ++S + V  +F+V+P  L      HF + S++ +    + ++ LFA  EGP FP+     
Sbjct: 36  LLSILPVCILFLVLPLFLS---CVHFCAISVLFLSWLANFKLLLFAFDEGPLFPLPPKLS 92

Query: 71  RF 66
           RF
Sbjct: 93  RF 94


>At5g55320.1 68418.m06894 membrane bound O-acyl transferase (MBOAT)
           family protein / wax synthase-related similar to  wax
           synthase [Simmondsia chinensis] GI:5020219 [EC 2.3.1.75]
          Length = 339

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = -1

Query: 257 PSVISFVI-VRAIFIVIPHTLINKLWFHFG---SDSIVLIFVWVSSQIRLFAEPEGPGFP 90
           P + S V+ + +IF V    ++  L+F F    S +   +    +S++ LF+  +GP FP
Sbjct: 27  PRIKSGVLRLLSIFPVCVLLVVLPLFFSFSIFTSTTAFFLSAIANSRLILFSFDQGPLFP 86

Query: 89  VGSTHFRF 66
           + S  FRF
Sbjct: 87  LPSNLFRF 94


>At5g16350.1 68418.m01911 expressed protein
          Length = 488

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 79  VDPTGKPGPSGSAKRRICDDTQTKMRTMLSLPKWNQSLL 195
           VDPT  P P      +ICDD +  ++TM ++  W + LL
Sbjct: 450 VDPTVIPDP-----HKICDDMEESLKTMKAV-LWERGLL 482


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,739,025
Number of Sequences: 28952
Number of extensions: 272176
Number of successful extensions: 669
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)