Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40127
(444 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 109 3e-23
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 94 1e-18
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 83 3e-15
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 83 3e-15
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 77 1e-13
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 75 7e-13
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 70 2e-11
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 68 1e-10
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 66 4e-10
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 63 3e-09
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 60 2e-08
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 59 4e-08
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 50 3e-05
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 48 1e-04
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 47 2e-04
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 44 0.002
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.005
UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1; Staphy... 41 0.014
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 38 0.097
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 36 0.30
UniRef50_UPI0000ECC867 Cluster: UPI0000ECC867 related cluster; n... 36 0.39
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 36 0.39
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 36 0.39
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 36 0.52
UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3; Methan... 35 0.69
UniRef50_UPI00015529D0 Cluster: PREDICTED: similar to DNA-direct... 35 0.91
UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5; Euryar... 35 0.91
UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6; Haloba... 35 0.91
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 34 1.2
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 34 1.2
UniRef50_P38904 Cluster: Protein SPP41; n=2; Saccharomyces cerev... 34 1.6
UniRef50_Q5ZP31 Cluster: Putative uncharacterized protein; n=2; ... 33 2.1
UniRef50_UPI00015B5C5C Cluster: PREDICTED: similar to hCG1735290... 33 3.7
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 33 3.7
UniRef50_Q6AK04 Cluster: Putative uncharacterized protein; n=4; ... 32 4.8
UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain pro... 32 4.8
UniRef50_A4QW08 Cluster: Predicted protein; n=1; Magnaporthe gri... 32 4.8
UniRef50_UPI000023CC9B Cluster: hypothetical protein FG07185.1; ... 32 6.4
UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease c... 32 6.4
UniRef50_A6SDE3 Cluster: Predicted protein; n=2; Sclerotiniaceae... 32 6.4
UniRef50_Q96M63 Cluster: Coiled-coil domain-containing protein 1... 32 6.4
UniRef50_UPI0000F1F5C7 Cluster: PREDICTED: hypothetical protein;... 31 8.5
UniRef50_Q0P4W4 Cluster: Putative uncharacterized protein MGC145... 31 8.5
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 109 bits (262), Expect = 3e-23
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD A
Sbjct: 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 87.8 bits (208), Expect = 9e-17
Identities = 53/117 (45%), Positives = 62/117 (52%)
Frame = +3
Query: 18 TATIRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
T TIRTRKFMTNRLL RKQ + K + + + + F+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ KK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 94.3 bits (224), Expect = 1e-18
Identities = 40/61 (65%), Positives = 52/61 (85%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+FGGGKSTGFAL+YD+LD A
Sbjct: 23 MVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGGGKSTGFALVYDSLDHA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 34.7 bits (76), Expect = 0.91
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Frame = +3
Query: 27 IRTRKFMTNRLLARKQ------HGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRF 188
IRTRKFM+NRLL R+Q H RC S K R++ + ++ R F
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDM--VFAFGFRTHF 64
Query: 189 QDKLRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 347
+ + L H KKFEP++RL R + P R++ +ER +
Sbjct: 65 GGG-KSTGFALVYDSLDH---AKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 82.6 bits (195), Expect = 3e-15
Identities = 37/61 (60%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = +1
Query: 79 VCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+FGGGKSTGF LIYD LD A
Sbjct: 29 VLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHFGGGKSTGFGLIYDNLDAA 88
Query: 256 R 258
+
Sbjct: 89 K 89
Score = 43.2 bits (97), Expect(2) = 4e-08
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +3
Query: 24 TIRTRKFMTNRLLARKQHGLRCFTSRKTN-RQQDRDP*EARQNVQGYSRCSVRIRFQDKL 200
T+RTRKFMTNRLL+RKQ L + N + D A+ S C +F+
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 201 RRWQVNWIRFDLRHTRSGKKFEPKHRLAR 287
+ + + KK+EPK+RL R
Sbjct: 71 GGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 35.9 bits (79), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 288 HGLYEKKRPTRKQRKERKNRMKKVRG 365
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 82.6 bits (195), Expect = 3e-15
Identities = 36/61 (59%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +1
Query: 79 VCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
V DVLHPG+ VSK E++EKLA+MY+V P+ +F F F+T+FGGGKS+G+ LIYDT++ A
Sbjct: 25 VIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCFKFRTHFGGGKSSGYGLIYDTVENA 84
Query: 256 R 258
+
Sbjct: 85 K 85
Score = 71.3 bits (167), Expect = 9e-12
Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +3
Query: 6 MSEGTATIRTRKFMTNRLLARKQHGLRCFTSRKTN-RQQDRDP*EARQNVQGYSRCSVRI 182
M+E TIRTR FMTNRLLARKQ + + N + + AR
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 183 RFQDKLRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 362
+F+ + + + KKFEPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 363 G 365
G
Sbjct: 121 G 121
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 77.4 bits (182), Expect = 1e-13
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 9/68 (13%)
Frame = +1
Query: 73 SMVCDVLHPGKPTVSKT--------EIREKLAKMYKVTPD-VVFVFGFKTNFGGGKSTGF 225
S +CDVLHPG+ VSK E++EK+AKMY V+ + V +FGF+T FGGGKSTGF
Sbjct: 21 SQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDEKCVSIFGFRTAFGGGKSTGF 80
Query: 226 ALIYDTLD 249
LIYD +D
Sbjct: 81 GLIYDNID 88
Score = 51.6 bits (118), Expect = 7e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +3
Query: 255 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 365
KKFEPKHRL R GL + + +RK KE+KNR+KK+RG
Sbjct: 91 KKFEPKHRLIRAGLKDAVQKSRKNIKEKKNRVKKLRG 127
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 74.9 bits (176), Expect = 7e-13
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +1
Query: 85 DVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYD 240
DVLHP PT SK +IRE+LAK KV V V+GF T +GGGKSTGFAL+YD
Sbjct: 24 DVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQYGGGKSTGFALVYD 75
Score = 38.3 bits (85), Expect = 0.074
Identities = 28/116 (24%), Positives = 52/116 (44%)
Frame = +3
Query: 18 TATIRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
T IRT+K + N LL+R+Q L +++ E + ++ +R V F +
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 365
+ + + K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 62 YGGGKSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 70.1 bits (164), Expect = 2e-11
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 64 RASSMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNFGGGKSTGFALIYD 240
R ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT FGGG++ GF LIY
Sbjct: 19 RRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLFGGGRTKGFGLIYK 78
Query: 241 TLDLAR 258
+D +
Sbjct: 79 NVDAVK 84
Score = 54.8 bits (126), Expect = 8e-07
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +3
Query: 24 TIRTRKFMTNRLLARKQHGLRCFTSRKTN-RQQDRDP*EARQNVQGYSRCSVRIRFQDKL 200
TIR +K+M+N LL RKQ L K + +++ A+ V F+
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 201 RRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGT 368
+ ++ + KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT
Sbjct: 66 GGGRTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGT 122
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 67.7 bits (158), Expect = 1e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNFGGGKSTGFALIYDTL 246
+V D+ HPG TEI+EKLAKMYKV + + GF T +GGGK++GFALIYDTL
Sbjct: 26 VVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKYGGGKTSGFALIYDTL 83
Score = 38.3 bits (85), Expect = 0.074
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 255 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 353
KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 87 KKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 65.7 bits (153), Expect = 4e-10
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = +1
Query: 79 VCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNFGGGKSTGFALIYDTL 246
V DV+HP VSK++++ KLAK+YKV + + +FGFKT FGGG+S+GF +IY+ +
Sbjct: 51 VVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAFGGGRSSGFCVIYNNI 107
Score = 51.6 bits (118), Expect = 7e-06
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +3
Query: 24 TIRTRKFMTNRLLARKQHGLRCF-TSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKL 200
T+R R+F+ N LLARKQ + S + D A+ + C V F+
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Query: 201 RRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPT-RKQRKERKNRMKKVRGT 368
+ + + + KKFE ++R R G+ EK T RK RKE KNR KKVRGT
Sbjct: 93 GGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKETKNRRKKVRGT 149
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 62.9 bits (146), Expect = 3e-09
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 85 DVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDT 243
++LHP KPT S+ + ++LA YK V V+G +T FGG ++TGFALIYDT
Sbjct: 57 ELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRTTFGGNRTTGFALIYDT 109
Score = 41.5 bits (93), Expect = 0.008
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +3
Query: 258 KFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 365
KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 115 KFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 60.1 bits (139), Expect = 2e-08
Identities = 40/91 (43%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +1
Query: 79 VCDVLHPGK-PTVSKTEIREKLAKMYKVTPDV--VFVFGFKTNFGGGKSTGFALIYDTLD 249
+ +V HP TV IR+KLA +YKV PD V +FGFKT FGGGK+TGF LIYD L
Sbjct: 29 IVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQVSLFGFKTKFGGGKTTGFGLIYDDLA 87
Query: 250 LARXXXXXXXXXXXXCTRRRGPRANSVKNVR 342
+ + R P SVK R
Sbjct: 88 SLKRFEPNYRKTRMGFGKARLPARKSVKERR 118
Score = 45.2 bits (102), Expect = 6e-04
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Frame = +3
Query: 27 IRTRKFMTNRLLARKQ------HGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRF 188
IRT +F N+LL RKQ H C T Q R V S+ S+ F
Sbjct: 12 IRTSQFKVNKLLNRKQFIVEVNHPHWCGT---VPTQLIRKKLATLYKVPDASQVSL-FGF 67
Query: 189 QDKLRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 365
+ K + S K+FEP +R R G + + P RK KER+NR KK+RG
Sbjct: 68 KTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKLRG 126
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 59.3 bits (137), Expect = 4e-08
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +1
Query: 79 VCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 249
V D+ H G ++ EI++++A K D+V +FG +T FGGG +TGF +YD+LD
Sbjct: 23 VIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFGGGHTTGFGFVYDSLD 79
Score = 47.2 bits (107), Expect = 2e-04
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +3
Query: 24 TIRTRKFMTNRLLARKQH--GLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
++ RK++ N+LL RKQ ++ ++ R + +D E ++ V + K
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKD--EVASRLKANKDLVVIFGLETK 62
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
F + KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 63 FGGGHTTGFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 49.6 bits (113), Expect = 3e-05
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +1
Query: 103 KPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNFGGGKSTGFALIYDTLDLAR 258
K +SK +R +L+K Y++ P ++F+FG K NFGG K + F IY L+ AR
Sbjct: 35 KFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFGGFKCSAFVYIYYNLEAAR 87
Score = 45.2 bits (102), Expect = 6e-04
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = +3
Query: 27 IRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRI-RFQDKLR 203
++T+KF N LL RKQ L +K N ++ E + + + I ++
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 204 RWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 365
++ + + + + + EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 70 GFKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = -1
Query: 255 CQIECVVDQSESS*LATSEVCLETEYEHYIGSNLVHFGELLTDLGLADGWFSWM*NIANH 76
C ++ VVD +++ ATS+V +T++++ I LVH +L +D L D F+WM I +H
Sbjct: 54 CIVKRVVDHAKACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDH 113
Query: 75 -AACAPTICWS*TC 37
A ++C +C
Sbjct: 114 LLALQKSVCHKLSC 127
Score = 41.5 bits (93), Expect = 0.008
Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = -2
Query: 401 LLGGRTYFRFLGTADLLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLARSSVS*IKAN 222
LL T+ F T LHSVL FFTL + LL++ + G V L L A
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAK 64
Query: 221 PVDLPPPKFVLK-PNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTMLLARQQSVGH 45
K K + N G +++ FS S L F K LLA Q+SV H
Sbjct: 65 ACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFS-LGDSSFAWMKYINDHLLALQKSVCH 123
Query: 44 ELASANSRC 18
+L+ ++S C
Sbjct: 124 KLSCSDSHC 132
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +1
Query: 94 HPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDL 252
HPG P SK EIREK++++Y+ D V V K +G ++T A IY ++++
Sbjct: 22 HPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTTLKAKIYSSIEV 74
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 43.6 bits (98), Expect = 0.002
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 85 DVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIY 237
++ HPG+PT S+ +++ KL M + P+ + ++ FG KS G+A Y
Sbjct: 22 EIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGSYKSKGYAKYY 72
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.005
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 174
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S24e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 118
Score = 40.7 bits (91), Expect = 0.014
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
+V + H GK T S+ IR + AK+Y V + V+V T +G G S IYD+++ A
Sbjct: 28 VVIRIAHIGKSTPSRGLIRHETAKIYGVEVEKVYVREINTEYGLGVSNATIHIYDSVERA 87
Query: 256 R 258
+
Sbjct: 88 K 88
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 37.9 bits (84), Expect = 0.097
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 64 RASSMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDT 243
R + C + GK T S+ E+R K+A + P+ V V KT FG ++ + IYDT
Sbjct: 18 RRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVKIYDT 76
Query: 244 LD 249
++
Sbjct: 77 VE 78
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 36.3 bits (80), Expect = 0.30
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
++ + +H T ++ +RE +AK + VFV KT FG G+S +Y+ +A
Sbjct: 22 LLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRSLAEVHVYNDSKIA 81
Query: 256 R 258
R
Sbjct: 82 R 82
>UniRef50_UPI0000ECC867 Cluster: UPI0000ECC867 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECC867 UniRef100 entry -
Gallus gallus
Length = 219
Score = 35.9 bits (79), Expect = 0.39
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 174 VRIRFQDKLRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 353
+ R K+++ N LR+T+ +K E K + + E+KR RK+RKERK + K
Sbjct: 24 ITTRQSGKMKQNTTNQEYLHLRNTKEKEKKEKKEKKEK----ERKRKERKERKERKRKKK 79
Query: 354 K 356
K
Sbjct: 80 K 80
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 35.9 bits (79), Expect = 0.39
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +1
Query: 79 VCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAR 258
+ V HP + T ++ E +EK+A+M V + + + + +G S +A +YD +D A+
Sbjct: 21 IIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYGLPYSFIYARVYDNIDTAK 80
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 35.9 bits (79), Expect = 0.39
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 88 VLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 249
V H T K+E+ KLA + V +VV + ++ FG ++ G+A IY +++
Sbjct: 23 VRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAKIYKSME 76
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 35.5 bits (78), Expect = 0.52
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 233 IKANPVDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTMLLAR 63
+ A V PP+ V KP TN + TL +L F+ + ++ G P K+++ +L+ R
Sbjct: 1 MSAFEVSCTPPRAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVR 57
>UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S24e -
Methanobacterium thermoautotrophicum
Length = 100
Score = 35.1 bits (77), Expect = 0.69
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 85 DVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 249
+ L+ G+ T E++ KL M D++ V FG ++TG+A IY++ +
Sbjct: 22 ECLYEGESTPKVLEVKNKLVAMLDADKDLLVVDKIDQGFGEPRATGYAKIYESAE 76
>UniRef50_UPI00015529D0 Cluster: PREDICTED: similar to DNA-directed
RNA polymerase II largest subunit; n=7; Theria|Rep:
PREDICTED: similar to DNA-directed RNA polymerase II
largest subunit - Mus musculus
Length = 354
Score = 34.7 bits (76), Expect = 0.91
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +3
Query: 99 RKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQVNWI--RFDLRHTRSGKKFEPK 272
R+ R+++R+ R+N + R R R + WQ + + + KK + K
Sbjct: 206 REREREREREREREREN-EKRERERERERLSEDAAEWQKKKLGKEEEEEKKKKKKKKKKK 264
Query: 273 HRLARHGLYEKKRPTRKQRKERKNRMKK 356
+ + EKK+ T+K+ +E K +MKK
Sbjct: 265 KKKKKKKKEEKKKKTKKEEEEEKKKMKK 292
>UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 101
Score = 34.7 bits (76), Expect = 0.91
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 109 TVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 249
T S+ ++R KLA M +++ + KT +G +S G+A +Y+ D
Sbjct: 29 TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGMQESKGYAKLYEDAD 75
>UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 102
Score = 34.7 bits (76), Expect = 0.91
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 85 DVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAR 258
+V+H + T S+ +R+ LA + V + T FG K+ G+A +YD + AR
Sbjct: 22 EVVHD-EATPSRLSVRDSLAATLNKDAEEVVIHKLDTKFGMRKTVGYAKVYDNPEYAR 78
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 34.3 bits (75), Expect = 1.2
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 88 VLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDL 252
V H G PT S+ +IR+ ++ D+V + T +G G S +Y D+
Sbjct: 35 VYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGISEATIHVYSEKDV 89
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 34.3 bits (75), Expect = 1.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 88 VLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 216
V H G PT + ++RE+LAK P++ +V T +G G S
Sbjct: 60 VYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYTQYGVGVS 102
>UniRef50_P38904 Cluster: Protein SPP41; n=2; Saccharomyces
cerevisiae|Rep: Protein SPP41 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 1435
Score = 33.9 bits (74), Expect = 1.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 231 DLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 356
DLR T+SGK +P R L ++ + K RK +K R KK
Sbjct: 660 DLRLTKSGKPKKPYRRWTPEELLKRSQEAEKPRKVKKERKKK 701
>UniRef50_Q5ZP31 Cluster: Putative uncharacterized protein; n=2;
Bracovirus|Rep: Putative uncharacterized protein -
Cotesia congregata bracovirus
Length = 255
Score = 33.5 bits (73), Expect = 2.1
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 12 EGTATIRTRKFMT-NRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRF 188
E T TIR K++ N++ R+Q LR + RQQDR + R Q + R R+R
Sbjct: 158 ETTYTIRMIKYLEDNQIRLRQQDHLR---QQDRLRQQDRLRQQDRLRRQDHLRQQDRLRQ 214
Query: 189 QDKLRR 206
QD+LRR
Sbjct: 215 QDRLRR 220
>UniRef50_UPI00015B5C5C Cluster: PREDICTED: similar to hCG1735290;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
hCG1735290 - Nasonia vitripennis
Length = 1798
Score = 32.7 bits (71), Expect = 3.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 189 QDKLRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 347
QD RW+ + R +H S E H+L R +K+ P RK++ +K R
Sbjct: 1443 QDNPNRWKTSTTRSGSKHHLSRLNVESSHKLPR----QKQNPPRKEKASQKRR 1491
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 32.7 bits (71), Expect = 3.7
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 94 HPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
H KPT + +R+KLA++ V +++ KT +G G S +YD+ + A
Sbjct: 42 HELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLSKVRVHVYDSPERA 95
>UniRef50_Q6AK04 Cluster: Putative uncharacterized protein; n=4;
Deltaproteobacteria|Rep: Putative uncharacterized
protein - Desulfotalea psychrophila
Length = 170
Score = 32.3 bits (70), Expect = 4.8
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 174 VRIRFQDKLRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEK-KRPTRKQRKERKNRM 350
V +R DKL R++V+W+ T SGK+ + +A+HG E R ++++ K+R+
Sbjct: 112 VGVRLNDKLGRYEVSWV------TSSGKQGKTSVSIAKHGKKEAFARACAIRQEKEKSRL 165
Query: 351 K 353
+
Sbjct: 166 E 166
>UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain protein;
n=1; Microscilla marina ATCC 23134|Rep: Von Willebrand
factor type A domain protein - Microscilla marina ATCC
23134
Length = 1088
Score = 32.3 bits (70), Expect = 4.8
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -2
Query: 212 LPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTMLLARQQS 54
LPPPK V+K +TN GV + + F+ +++L + G +S+ L ++S
Sbjct: 885 LPPPKIVIKTDTN-YQGVNMTSMKGFAHNNLMLLLDVSGSMSSKDKLPLLKES 936
>UniRef50_A4QW08 Cluster: Predicted protein; n=1; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 470
Score = 32.3 bits (70), Expect = 4.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 307 FFSYRPWRANLCLGSNFLPDRVCRR 233
F SY+PW +L LG+ F R CRR
Sbjct: 22 FVSYKPWLLHLMLGTFFNASRFCRR 46
>UniRef50_UPI000023CC9B Cluster: hypothetical protein FG07185.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07185.1 - Gibberella zeae PH-1
Length = 1041
Score = 31.9 bits (69), Expect = 6.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 237 RHTRSGKKFEPKHRLARHG----LYEKKRPTRKQRKERKNRMKKV 359
R T SGKKFEP+ + + +RP R +R ER+ R ++V
Sbjct: 157 RRTDSGKKFEPERKYESESKPPRVERVERPERNERVERQERPERV 201
>UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease
component transmembrane protein; n=1; Spiroplasma
citri|Rep: Hypothetical abc transporter permease
component transmembrane protein - Spiroplasma citri
Length = 1415
Score = 31.9 bits (69), Expect = 6.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 70 SSMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYD 240
+S+V D L+ GK +KT+I K A +Y + + +F F G G S YD
Sbjct: 786 NSLVSDYLYNGKWLSTKTDISAKNAHLYAQQLNNMIIFNFMV--GKGASLSIGTFYD 840
>UniRef50_A6SDE3 Cluster: Predicted protein; n=2;
Sclerotiniaceae|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 533
Score = 31.9 bits (69), Expect = 6.4
Identities = 30/110 (27%), Positives = 50/110 (45%)
Frame = +3
Query: 27 IRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRR 206
+ RKF+ +R L +++ R R R++ RD E +G ++ S R R ++ R
Sbjct: 289 VEYRKFVRDRELEQERERER---DRDVERKRARDREEEILRERGRAQSSDRERKEELARE 345
Query: 207 WQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 356
+ +LR + E KHR E++R KER+ RM+K
Sbjct: 346 RERRRRDDELRRADEQNRREEKHRR------EREREKELDDKEREERMRK 389
>UniRef50_Q96M63 Cluster: Coiled-coil domain-containing protein 114;
n=11; Eutheria|Rep: Coiled-coil domain-containing
protein 114 - Homo sapiens (Human)
Length = 681
Score = 31.9 bits (69), Expect = 6.4
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = -3
Query: 403 HFLEAAPTLDFLVPRTFFILFLRSLRCLRVGLFFSYRPWRANLCLGSNFLPDRVCRRSKR 224
H AAPTL +L +FF+ L L L V +FFS W+A++ FLP ++ +
Sbjct: 616 HEGHAAPTLPWLSVGSFFVSLL-PLFALWVSVFFS--QWQASV-----FLPLQLFSSALH 667
Query: 223 IQLTCHLRSLS 191
+LTC R LS
Sbjct: 668 HRLTCVSRFLS 678
>UniRef50_UPI0000F1F5C7 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 835
Score = 31.5 bits (68), Expect = 8.5
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 99 RKTNRQQDRDP*EARQNVQG-YSRCSVRIRFQDKLRRWQVNWIRFDLRHTRSGKKFEPKH 275
++ N + DR +R++ + YSR R R + + RR+ + R R KK+
Sbjct: 172 KQENAKGDRARSRSRESSRRRYSRSRSRSRERGR-RRYSRSRSRSQDRSRSHHKKYRSSS 230
Query: 276 RLARHGLYEKKRPTRKQRKERKNR 347
R + G Y KR + R ER R
Sbjct: 231 RERKDGRYRSKRSRSRDRSERSRR 254
>UniRef50_Q0P4W4 Cluster: Putative uncharacterized protein
MGC145504; n=1; Xenopus tropicalis|Rep: Putative
uncharacterized protein MGC145504 - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 774
Score = 31.5 bits (68), Expect = 8.5
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -3
Query: 412 HSHHFLEAAPTLDFLVPRTFFILFLRSLRCLRVGLFFSYRPWRANLCLGSNFLP 251
H E+ L +PRT L R R L L + R WR N+ GSN P
Sbjct: 527 HIQQLRESIEVLSCTLPRTLGALCARMARDLFHNLMPTGRYWRGNVSQGSNVTP 580
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,546,379
Number of Sequences: 1657284
Number of extensions: 9247230
Number of successful extensions: 29419
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 27912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29217
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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