Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40127
(444 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24 pro... 109 4e-24
U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24 pro... 109 4e-24
M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24 pro... 109 4e-24
BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein pr... 109 4e-24
BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24 p... 109 4e-24
BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24 p... 109 4e-24
AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24 p... 109 4e-24
AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24 p... 109 4e-24
BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein. 31 1.8
AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein. 31 1.8
DQ013876-1|AAY26238.1| 432|Homo sapiens cAMP regulatory element... 30 4.1
AK001925-1|BAA91981.1| 432|Homo sapiens protein ( Homo sapiens ... 30 4.1
AB034205-1|BAA90542.1| 432|Homo sapiens cisplatin resistance-as... 30 4.1
>U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 109 bits (262), Expect = 4e-24
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD A
Sbjct: 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 87.8 bits (208), Expect = 1e-17
Identities = 53/117 (45%), Positives = 62/117 (52%)
Frame = +3
Query: 18 TATIRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
T TIRTRKFMTNRLL RKQ + K + + + + F+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ KK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 109 bits (262), Expect = 4e-24
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD A
Sbjct: 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 87.8 bits (208), Expect = 1e-17
Identities = 53/117 (45%), Positives = 62/117 (52%)
Frame = +3
Query: 18 TATIRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
T TIRTRKFMTNRLL RKQ + K + + + + F+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ KK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 109 bits (262), Expect = 4e-24
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD A
Sbjct: 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 87.8 bits (208), Expect = 1e-17
Identities = 53/117 (45%), Positives = 62/117 (52%)
Frame = +3
Query: 18 TATIRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
T TIRTRKFMTNRLL RKQ + K + + + + F+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ KK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein
protein.
Length = 132
Score = 109 bits (262), Expect = 4e-24
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD A
Sbjct: 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 86.2 bits (204), Expect = 5e-17
Identities = 52/117 (44%), Positives = 62/117 (52%)
Frame = +3
Query: 18 TATIRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
T TIRTRKFMTNRLL RKQ + K + + + + F+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ KK EPKHRLARHGLYEKK+ +R+QRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSREQRKERKNRMKKVRGT 120
>BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 109 bits (262), Expect = 4e-24
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD A
Sbjct: 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 87.8 bits (208), Expect = 1e-17
Identities = 53/117 (45%), Positives = 62/117 (52%)
Frame = +3
Query: 18 TATIRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
T TIRTRKFMTNRLL RKQ + K + + + + F+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ KK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 109 bits (262), Expect = 4e-24
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD A
Sbjct: 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 87.8 bits (208), Expect = 1e-17
Identities = 53/117 (45%), Positives = 62/117 (52%)
Frame = +3
Query: 18 TATIRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
T TIRTRKFMTNRLL RKQ + K + + + + F+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ KK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 109 bits (262), Expect = 4e-24
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD A
Sbjct: 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 87.8 bits (208), Expect = 1e-17
Identities = 53/117 (45%), Positives = 62/117 (52%)
Frame = +3
Query: 18 TATIRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
T TIRTRKFMTNRLL RKQ + K + + + + F+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ KK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 109 bits (262), Expect = 4e-24
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD A
Sbjct: 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 87.8 bits (208), Expect = 1e-17
Identities = 53/117 (45%), Positives = 62/117 (52%)
Frame = +3
Query: 18 TATIRTRKFMTNRLLARKQHGLRCFTSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDK 197
T TIRTRKFMTNRLL RKQ + K + + + + F+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 198 LRRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ KK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 409 SHHFLEAAPTLDFLVPRTFFILFLRSLRCL 320
S ++ P L FL+P FI+FL +LRCL
Sbjct: 1191 SEERMDVQPFLVFLIPFLHFIIFLFTLRCL 1220
>AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein.
Length = 1591
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 409 SHHFLEAAPTLDFLVPRTFFILFLRSLRCL 320
S ++ P L FL+P FI+FL +LRCL
Sbjct: 1161 SEERMDVQPFLVFLIPFLHFIIFLFTLRCL 1190
>DQ013876-1|AAY26238.1| 432|Homo sapiens cAMP regulatory element
associated protein 1 protein.
Length = 432
Score = 29.9 bits (64), Expect = 4.1
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +3
Query: 96 SRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQVNWIRFDLRHTRSGKKFEPKH 275
SR ++R DR +R + + SR R R +D RR + R + +H RS + +
Sbjct: 297 SRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRD--RRRSRSHDRSERKH-RSRSRDRRRS 353
Query: 276 RLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ Y+ + +R + ++RK++ K+ RG+
Sbjct: 354 KSRDRKSYKHRSKSRDREQDRKSKEKEKRGS 384
>AK001925-1|BAA91981.1| 432|Homo sapiens protein ( Homo sapiens
cDNA FLJ11063 fis, clone PLACE1004814, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 432
Score = 29.9 bits (64), Expect = 4.1
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +3
Query: 96 SRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQVNWIRFDLRHTRSGKKFEPKH 275
SR ++R DR +R + + SR R R +D RR + R + +H RS + +
Sbjct: 297 SRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRD--RRRSRSHDRSERKH-RSRSRDRRRS 353
Query: 276 RLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ Y+ + +R + ++RK++ K+ RG+
Sbjct: 354 KSRDRKSYKHRSKSRDREQDRKSKEKEKRGS 384
>AB034205-1|BAA90542.1| 432|Homo sapiens cisplatin
resistance-associated overexpressed protein protein.
Length = 432
Score = 29.9 bits (64), Expect = 4.1
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +3
Query: 96 SRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQVNWIRFDLRHTRSGKKFEPKH 275
SR ++R DR +R + + SR R R +D RR + R + +H RS + +
Sbjct: 297 SRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRD--RRRSRSHDRSERKH-RSRSRDRRRS 353
Query: 276 RLARHGLYEKKRPTRKQRKERKNRMKKVRGT 368
+ Y+ + +R + ++RK++ K+ RG+
Sbjct: 354 KSRDRKSYKHRSKSRDREQDRKSKEKEKRGS 384
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,971,919
Number of Sequences: 237096
Number of extensions: 1483254
Number of successful extensions: 3970
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3955
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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