Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40127
(444 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 95 2e-20
Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 3.5
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 3.5
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 3.5
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 3.5
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 27 8.1
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 27 8.1
U10438-14|ABB88242.1| 441|Caenorhabditis elegans Hypothetical p... 27 8.1
U00054-1|AAA50716.1| 91|Caenorhabditis elegans Hypothetical pr... 27 8.1
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 27 8.1
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 95.1 bits (226), Expect = 2e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLA 255
MV +V+HPG+PTV K +IREK+AK+YK TPD V FGF++ GGGKS GFAL+YDT+D A
Sbjct: 23 MVVEVIHPGRPTVPKADIREKIAKLYKTTPDTVIPFGFESKIGGGKSKGFALVYDTIDFA 82
Query: 256 R 258
+
Sbjct: 83 K 83
Score = 66.5 bits (155), Expect = 8e-12
Identities = 48/117 (41%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +3
Query: 24 TIRTRKFMTNRLLARKQHGLRCF-TSRKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKL 200
TIRTRK +TN+LL RKQ + R T + D A+ + + F+ K+
Sbjct: 6 TIRTRKVLTNKLLYRKQMVVEVIHPGRPTVPKADIREKIAKL-YKTTPDTVIPFGFESKI 64
Query: 201 RRWQVNWIRFDLRHTRSGKKFEPKHRLARHGLYEK-KRPTRKQRKERKNRMKKVRGT 368
+ KKFEPK+RL R GL K ++P RKQRKERKNR KKVRGT
Sbjct: 65 GGGKSKGFALVYDTIDFAKKFEPKYRLVRMGLATKVEKPGRKQRKERKNRQKKVRGT 121
>Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical
protein T26G10.3 protein.
Length = 91
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 76 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 174
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 225 RFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 362
R + + R+ +K + + E+KR +K+R ERK +KVR
Sbjct: 795 RKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVR 840
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 225 RFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 362
R + + R+ +K + + E+KR +K+R ERK +KVR
Sbjct: 1086 RKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVR 1131
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 225 RFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 362
R + + R+ +K + + E+KR +K+R ERK +KVR
Sbjct: 1101 RKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVR 1146
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 225 RFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 362
R + + R+ +K + + E+KR +K+R ERK +KVR
Sbjct: 1101 RKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVR 1146
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 298 YRPWRANLCLGSNFLPDRVC 239
+R W+ NLC +N LPD C
Sbjct: 349 HRHWKCNLCNRNNDLPDDFC 368
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 225 RFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 362
R + + R+ +K + + E+KR +K+R ERK +KVR
Sbjct: 795 RKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVR 840
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 225 RFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 362
R + + R+ +K + + E+KR +K+R ERK +KVR
Sbjct: 1086 RKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVR 1131
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 225 RFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 362
R + + R+ +K + + E+KR +K+R ERK +KVR
Sbjct: 1101 RKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVR 1146
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 225 RFDLRHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 362
R + + R+ +K + + E+KR +K+R ERK +KVR
Sbjct: 1101 RKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVR 1146
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 314 GPLLLVQAVAG*PVLGLELLARSSVS*IKANPVDLPPP 201
GP+L V V+ P G ++ S +PV LPPP
Sbjct: 2216 GPILTVVPVSSAPTSGAVSSTTNTPSPTNQSPVTLPPP 2253
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 246 RSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 362
+ KK E + A EKK R++RKE+++ +K R
Sbjct: 467 KKDKKHETEEERAERKRKEKKEKERQERKEKEHDEQKKR 505
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 354 SSFCSYVLYAVCAWASSSRTGRGGLTC 274
+SFC+Y L+ CA + + GG C
Sbjct: 99 ASFCNYPLFVFCAGSIGLGSWMGGCVC 125
>U10438-14|ABB88242.1| 441|Caenorhabditis elegans Hypothetical
protein B0280.11 protein.
Length = 441
Score = 26.6 bits (56), Expect = 8.1
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Frame = +1
Query: 49 PTDCWRASSM---VCDVLHPGK-PTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 216
P DC A +CD GK PTVS I A ++ D +N+G G++
Sbjct: 289 PKDCAEAPFAMIEICDFWPDGKIPTVSYGRIAATAASVFDSDIDSDATCAIVSNYGAGRA 348
Query: 217 TGF 225
F
Sbjct: 349 GSF 351
>U00054-1|AAA50716.1| 91|Caenorhabditis elegans Hypothetical
protein K07E12.2 protein.
Length = 91
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 237 RHTRSGKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKV 359
RH R+ +K E K G + K TRK KE+K KK+
Sbjct: 8 RHKRNREK-ELKKLSEGRGKWFKGVETRKSNKEKKKNSKKI 47
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
defective protein 45 protein.
Length = 1076
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 251 WQEVRAQ--AQVSPPRPVREEEAHAQTA*RT*EQNEEGPR 364
W+ V+A+ A + + REE A A+ R EQN+E R
Sbjct: 593 WERVKAEKTAAAATEQAKREEAARAEEMKRLDEQNKESER 632
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,664,412
Number of Sequences: 27780
Number of extensions: 222827
Number of successful extensions: 849
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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