Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40126
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 52 6e-07
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 38 0.011
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 38 0.011
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 36 0.033
04_03_0897 - 20646750-20646918,20647927-20648038,20649650-206501... 33 0.17
03_02_0878 + 12088119-12088233,12088511-12088608,12088689-120887... 33 0.17
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 33 0.23
02_04_0131 - 20046033-20046505,20047140-20047233,20047343-200474... 33 0.31
01_03_0084 - 12286416-12286514,12286632-12286683,12286771-122868... 33 0.31
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 32 0.40
05_06_0264 + 26756337-26756411,26756494-26756594,26757196-267573... 32 0.53
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 32 0.53
03_01_0107 + 849489-850652,850745-850835,850926-851083,851180-85... 31 0.70
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 31 0.93
06_03_0940 + 26145746-26145879,26146740-26146821,26147349-261474... 31 0.93
03_01_0363 + 2827990-2828055,2828215-2829306,2829715-2829837,282... 31 0.93
08_02_0028 - 11371547-11371657,11372326-11372518,11372738-113728... 31 1.2
12_01_0418 - 3304741-3304904,3305579-3305762,3307254-3307347,330... 30 1.6
03_06_0560 + 34726338-34727243 29 3.8
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560... 29 5.0
01_01_0742 + 5759505-5759639,5760497-5760593,5760694-5760755,576... 29 5.0
11_06_0627 + 25633537-25633884,25635246-25635869 28 6.6
07_01_0972 - 8176013-8176960 28 6.6
07_01_0631 + 4714843-4715016,4715149-4715249,4715972-4716104,471... 28 6.6
04_04_0589 + 26449184-26450500,26452220-26452310,26452428-264525... 28 6.6
02_01_0283 + 1903869-1904786 28 6.6
09_02_0022 + 3065644-3065953,3066048-3067162,3067261-3067437,306... 28 8.7
08_02_1111 + 24377268-24377444,24377543-24377630,24378072-243781... 28 8.7
07_03_0971 + 23038409-23039134,23040321-23040611 28 8.7
06_03_0914 + 25920277-25920405,25920783-25920810,25920890-259209... 28 8.7
06_02_0062 - 11047883-11048032,11048337-11048459,11048625-110487... 28 8.7
03_05_0802 - 27823213-27823701,27823911-27823959,27824053-278241... 28 8.7
03_05_0700 + 26920743-26920771,26920880-26920991,26921205-269213... 28 8.7
01_06_0303 + 28324155-28325045,28326208-28326321 28 8.7
>03_05_1065 +
30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/77 (37%), Positives = 37/77 (48%)
Frame = +3
Query: 3 IYFDISPCGRYLVSGGTDGVVKVWSLDHIDWHSSLDPVNNTTDDVTYKFPLYKDCCNSIS 182
I+FDI PCGR+L +GG DG+V ++ L W VT F D N +
Sbjct: 326 IHFDIEPCGRHLATGGQDGMVHIYDLQGGQW-------------VT-AFQAAADTVNGFA 371
Query: 183 IHPYRPILATGSGQYHF 233
HPY P+ T SG F
Sbjct: 372 FHPYLPLATTSSGHRRF 388
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVWSLDHIDWHSSLDPVNNTTDDVTYKFPLYKDCCNSISIHPYR 197
+P GR++VSGG+D VK+W L T + + F ++ N + HP+
Sbjct: 157 TPDGRWIVSGGSDNSVKIWDL--------------TAGKLLHDFRNHEGPINCLDFHPHE 202
Query: 198 PILATGS 218
+LATGS
Sbjct: 203 FLLATGS 209
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVWSLDHIDWHSSLDPVNNTTDDVTYKFPLYKDCCNSISIHPYR 197
+P GR++VSGG D VVK+W L T + + F ++ I HP+
Sbjct: 174 TPDGRWVVSGGEDNVVKLWDL--------------TAGKLLHDFKCHEGQIQCIDFHPHE 219
Query: 198 PILATGS 218
+LATGS
Sbjct: 220 FLLATGS 226
>01_06_0923 +
33044283-33044433,33044826-33045242,33046209-33046538,
33046806-33046876,33047283-33047357,33047435-33047578,
33047645-33047816,33047933-33048616,33048711-33048767,
33048850-33048956,33049485-33049610,33050221-33050295,
33050387-33050499,33050789-33050905,33051384-33051444,
33051690-33051763,33052267-33052388,33052472-33052620,
33053525-33053635,33053946-33054008,33054689-33054722,
33055253-33055375,33055971-33056033,33056130-33056196,
33056311-33056356,33056446-33056552,33056923-33056971,
33057208-33057273,33057544-33057630
Length = 1286
Score = 35.9 bits (79), Expect = 0.033
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVWSLDHIDWHSSLDPVNNTTDDVTYKFPLYKDCCNSISIHPYR 197
+P GR++V+GG D +VKVW L T + + F + I HP
Sbjct: 249 TPDGRWVVTGGEDNIVKVWDL--------------TAGKLLHDFKFHSGQIRCIDFHPQE 294
Query: 198 PILATGS 218
+LATGS
Sbjct: 295 FLLATGS 301
>04_03_0897 -
20646750-20646918,20647927-20648038,20649650-20650108,
20650237-20650330,20650449-20650525,20650637-20650688,
20650770-20650927,20651191-20651281,20651465-20652529
Length = 758
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVWSLDHIDWHSSL---DPVNNTTDDVT 140
SP G YL +GG D +V++W + ++ S L D N D +T
Sbjct: 264 SPSGWYLATGGEDCIVRIWQIMEVEASSKLHGGDNPQNYDDKIT 307
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = +3
Query: 30 RYLVSGGTDGVVKVW-SLDH--IDW 95
RY +SG DG V+VW +LD +DW
Sbjct: 397 RYFISGSIDGKVRVWDALDKRVVDW 421
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 27 GRYLVSGGTDGVVKVWSLD 83
GRYL+S G D V +W+ D
Sbjct: 529 GRYLISAGLDSNVYIWNFD 547
>03_02_0878 +
12088119-12088233,12088511-12088608,12088689-12088795,
12088900-12088974,12089053-12089124,12089221-12089382,
12089476-12089550,12089635-12089706,12089813-12089884,
12090150-12090224,12090329-12090400,12090491-12090625,
12090712-12091187,12091270-12091779,12091876-12092111,
12092200-12092712
Length = 954
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 93 WHSSLDPVNNTT-DDVTYKFPLYKDCCNSISIHPYRPILATGSGQ 224
W S DP +++ D V Y +PL DC + IS + +LA GQ
Sbjct: 56 WGQSDDPCSDSPWDGVVYVYPLLPDCFSKISTMGIKGVLAADIGQ 100
>01_06_0102 -
26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 33 YLVSGGTDGVVKVWSLDHIDWHSSLDP 113
+LVSGG+DG++ +WS DHI L P
Sbjct: 140 HLVSGGSDGLLILWSADHIHDSRELVP 166
>02_04_0131 -
20046033-20046505,20047140-20047233,20047343-20047434,
20047560-20047611,20047721-20047878,20048190-20048280,
20048397-20049455
Length = 672
Score = 32.7 bits (71), Expect = 0.31
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 15 ISPCGRYLVSGGTDGVVKVWSLD 83
++P GRYL+S G D +++W+ D
Sbjct: 528 LTPDGRYLISAGRDSKIRIWNFD 550
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVWSLDHID 92
S G +L SGG D VV+VW + ++
Sbjct: 270 SSSGWHLASGGEDCVVRVWQITEVE 294
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +3
Query: 30 RYLVSGGTDGVVKVWSLDH---IDW 95
RY +SG DG V+VW + +DW
Sbjct: 395 RYFISGSIDGKVRVWDVSDKRVVDW 419
>01_03_0084 -
12286416-12286514,12286632-12286683,12286771-12286871,
12287498-12287650,12287703-12287762,12287872-12287998,
12288581-12288708,12289196-12289291,12289473-12289526,
12289603-12289689,12290954-12291057,12291163-12291246,
12291374-12291422,12291523-12291886,12292186-12292226
Length = 532
Score = 32.7 bits (71), Expect = 0.31
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVWSLDHIDWHSSLDPVNNTTDDVTYKFPLYKDCCNSISIHPYR 197
SP G+YLVS DG+++VW D+I D + D+ F ++ D S+
Sbjct: 227 SPDGQYLVSCSVDGIIEVW--DYISGKLKKD-LQYQADE---SFMMHDDAVLSVDFSRDS 280
Query: 198 PILATGS 218
+LA+GS
Sbjct: 281 EMLASGS 287
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3
Query: 27 GRYLVSGGTDGVVKVWSLD 83
G+YL++GG D +V+VWS+D
Sbjct: 393 GKYLLTGGEDDLVQVWSMD 411
>05_06_0264 +
26756337-26756411,26756494-26756594,26757196-26757369,
26757449-26757548,26757869-26758006,26758104-26758185,
26758631-26758680,26758748-26758873
Length = 281
Score = 31.9 bits (69), Expect = 0.53
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVWSLDHID----WHSSLDPV 116
+P G+Y++SG DG + W+++ I W+S + P+
Sbjct: 215 TPDGQYVISGSGDGTLHAWNINTIQEIACWNSHIGPI 251
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 31.9 bits (69), Expect = 0.53
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVWSL 80
SP G+ L +GG DGVV+VW++
Sbjct: 222 SPDGQLLATGGEDGVVRVWAV 242
>03_01_0107 +
849489-850652,850745-850835,850926-851083,851180-851231,
852373-852452,852540-852633,852711-853231,854087-854202,
854242-854293
Length = 775
Score = 31.5 bits (68), Expect = 0.70
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 27 GRYLVSGGTDGVVKVWSLDHIDWHSSLD 110
G+YL +GG DGVV+VW + + + LD
Sbjct: 283 GQYLATGGEDGVVRVWRVVEGERPNELD 310
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVW 74
SP GR+L SGG D VV VW
Sbjct: 435 SPDGRFLASGGEDRVVHVW 453
>06_03_0940 +
26145746-26145879,26146740-26146821,26147349-26147427,
26147527-26147624,26148392-26148479,26148589-26148686,
26148881-26148982,26149237-26149281,26150535-26150574,
26150988-26151074,26151254-26151330,26151746-26151808,
26152650-26152766,26152905-26153116,26153690-26153785,
26153869-26153935,26154028-26154081
Length = 512
Score = 31.1 bits (67), Expect = 0.93
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 15 ISPCGRYLVSGGTDGVVKVWSL 80
+SP GRY+ SG DG + +W L
Sbjct: 416 MSPDGRYMASGDEDGTIMMWDL 437
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 12 DISPCGRYLVSGGTDGVVKVWSLDHI 89
+ SP G Y S D ++WS+D I
Sbjct: 331 EFSPVGHYFASASHDRTARIWSMDKI 356
>03_01_0363 +
2827990-2828055,2828215-2829306,2829715-2829837,
2829994-2830110,2830248-2830429,2830558-2830744,
2830846-2831055,2831177-2831305,2832179-2832247,
2832751-2832873,2832957-2833007,2833101-2833250
Length = 832
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 12 DISPCGRYLVSGGTDGVVKVWSLDHIDWHSSL 107
DIS G +V+G D +K+W +D D H S+
Sbjct: 490 DISSDGVLIVTGSADKNLKIWGMDFGDCHKSI 521
>08_02_0028 -
11371547-11371657,11372326-11372518,11372738-11372814,
11373498-11373608,11374533-11374659,11374745-11375022
Length = 298
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 266 NNEAVDSSSDDSINQYDIRYSSHSENCLTFW----WT-GDVIELNKNLRRCV*ADESLCI 430
N + V SS+ S ++ + + E C ++W W+ G V+E +R C D + I
Sbjct: 34 NGKRVRGSSERSAPKFGVLFEDVLEECRSWWHSLHWSPGGVLECRHYIRSCTSVD-AFYI 92
Query: 431 SIYT 442
+IYT
Sbjct: 93 NIYT 96
>12_01_0418 -
3304741-3304904,3305579-3305762,3307254-3307347,
3308530-3308882,3309140-3309274,3309354-3309392,
3309587-3309652,3309739-3309834,3310291-3310527,
3310602-3310722,3310854-3310889,3313062-3313159,
3313298-3313591,3313842-3313904,3314280-3314438,
3314557-3314655
Length = 745
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 15 ISPCGRYLVSGGTDGVVKVWSL 80
+ P GRY +SG +D ++++W L
Sbjct: 233 LDPTGRYCLSGSSDSMIRLWDL 254
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 15 ISPCGRYLVSGGTDGVVKVW 74
+S G LVSGGT+ VV+VW
Sbjct: 191 MSDTGNTLVSGGTEKVVRVW 210
>03_06_0560 + 34726338-34727243
Length = 301
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 36 LVSGGTDGVVKVWSLDHIDWH-SSLDPVNNTTDDV 137
LVSGG D VVKVW+ + W S+ P + TD V
Sbjct: 178 LVSGGFDCVVKVWAFVNGSWKLDSVLPSDMHTDCV 212
>04_04_0990 -
29955207-29955551,29955639-29955813,29955887-29956017,
29956317-29956436,29956908-29956984,29957070-29957316,
29957413-29957569,29958191-29958309,29958421-29958555,
29958636-29958921,29959009-29959211,29959732-29959881,
29960084-29960266,29960931-29961278
Length = 891
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 33 YLVSGGTDGVVKVWSLDHIDWHSSLDPVNNTTD-DVTYKFPLYKDCCNSISIHPYRPILA 209
+ VSG +D +K+WS W +LD V + + NS+S+ P ++
Sbjct: 469 FFVSGSSDRTIKIWS-----WDDTLDDVGSEVPLKAKAVVAAHDKDINSLSVSPNDGLVC 523
Query: 210 TGS 218
+GS
Sbjct: 524 SGS 526
>01_01_0742 +
5759505-5759639,5760497-5760593,5760694-5760755,
5760842-5760898,5761062-5761118,5761501-5761534,
5761788-5761822,5761956-5762046,5762312-5762633,
5762710-5762845,5763031-5763120
Length = 371
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 27 GRYLVSGGTDGVVKVWSLDHIDWHSSLDPVNNTTDDV 137
G++LVSGG D +K+W DW N + ++
Sbjct: 306 GKFLVSGGNDSSIKLW-----DWSKGFSSETNNSAEL 337
>11_06_0627 + 25633537-25633884,25635246-25635869
Length = 323
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 12 DISPCGRYLVSGGTDGVVKVWSLDHIDWHSSLDPVNNTTDDV 137
D+SP G + +G +D V++W I+ +S+ ++N D V
Sbjct: 252 DVSPDGMAVATGSSDRTVRLWD---INTRASVQTMSNHNDQV 290
>07_01_0972 - 8176013-8176960
Length = 315
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 36 LVSGGTDGVVKVWSLDHIDW 95
LVSGG D VVKVW + W
Sbjct: 178 LVSGGFDSVVKVWGFVNGGW 197
>07_01_0631 +
4714843-4715016,4715149-4715249,4715972-4716104,
4716471-4716562,4716857-4716956,4717044-4717116,
4717198-4717318,4717778-4717897,4718643-4718733,
4718811-4718839,4719061-4719131,4719217-4719395
Length = 427
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 12 DISPCGRYLVSGGTDGVVKVWSLD 83
DIS +LVS TDG ++W +D
Sbjct: 165 DISLDSEFLVSTSTDGSARIWKID 188
>04_04_0589 +
26449184-26450500,26452220-26452310,26452428-26452585,
26452670-26452768,26453296-26453345,26453654-26453705,
26453773-26454058,26454286-26454400,26454938-26455020,
26455381-26455466
Length = 778
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 27 GRYLVSGGTDGVVKVWSLDHID 92
GRYL S G D V+ VW + ++
Sbjct: 330 GRYLASAGEDCVIHVWEVSELE 351
>02_01_0283 + 1903869-1904786
Length = 305
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 36 LVSGGTDGVVKVWSLDHIDWHSSLDP 113
L SGG D VKVW L + W P
Sbjct: 182 LASGGCDNTVKVWKLYNGSWRMDCFP 207
>09_02_0022 +
3065644-3065953,3066048-3067162,3067261-3067437,
3067535-3067648,3068614-3068718,3068930-3069064,
3069148-3069203,3069277-3069382,3069515-3069631,
3069705-3069831,3069915-3070141,3070164-3070727
Length = 1050
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVWSL 80
SP GRYLV+ G D V +W +
Sbjct: 258 SPNGRYLVTAGLDKQVLIWDV 278
>08_02_1111 +
24377268-24377444,24377543-24377630,24378072-24378157,
24378358-24378511,24378723-24378883,24378964-24379632,
24379860-24380058,24380188-24380405,24380578-24380755,
24380859-24381358
Length = 809
Score = 27.9 bits (59), Expect = 8.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 33 YLVSGGTDGVVKVWSLD 83
YL+SG +DG++ W +D
Sbjct: 96 YLLSGSSDGIIMAWKID 112
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 18 SPCGRYLVSGGTDGVVKVWSLDHIDWHSSLDPVNNTTDDVTYKFPLYKDCCNS----ISI 185
SPCGR L + DG V + S + ++L + D+++ + C S + I
Sbjct: 34 SPCGRLLATASLDGTVALLSPSSLAAIATLRGHADGVSDISWSTDSFYLCSASDDRTLRI 93
Query: 186 HPYRPILA 209
RP+LA
Sbjct: 94 WDVRPVLA 101
>06_03_0914 +
25920277-25920405,25920783-25920810,25920890-25920990,
25921356-25921479,25921793-25921903,25922222-25922397,
25922766-25922848,25922935-25923007,25923630-25923695,
25923776-25923818,25924600-25924739,25924878-25925090,
25925397-25925481,25925558-25925852,25926855-25927110,
25927237-25927450,25927701-25927912,25928054-25928203
Length = 832
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 36 LVSGGTDGVVKVWSLDHIDWHS 101
L SGG+ GV+ +W+L+ HS
Sbjct: 170 LASGGSSGVISIWNLEKRRLHS 191
>06_02_0062 -
11047883-11048032,11048337-11048459,11048625-11048754,
11049232-11049306,11050402-11050467,11050516-11050772
Length = 266
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 318 ISYWLIESSELESTASL--FVFSPKILSGL*NDIGQIR*PIWVYMDELICY 172
+++ +++ E S +S F F +++ DIG+ + +WV DEL+ Y
Sbjct: 200 MAHMVVDQKEDSSISSFKRFFFKSQVVGATKYDIGKCQDHVWVTKDELLEY 250
>03_05_0802 -
27823213-27823701,27823911-27823959,27824053-27824120,
27824208-27824276,27824391-27824460,27824556-27824635,
27824706-27824784,27824949-27825025,27825110-27825176,
27825285-27825381,27825478-27825574,27825701-27825739,
27825843-27825907,27826034-27826142,27826275-27826487
Length = 555
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 15 ISPCGRYLVSGGTDGVVKVWSLD 83
ISP G +++ G +DG V +W +D
Sbjct: 334 ISPDGTHILGGSSDGNVYLWQVD 356
>03_05_0700 +
26920743-26920771,26920880-26920991,26921205-26921306,
26921391-26921503,26921858-26921927,26922348-26922425,
26922500-26922616,26922738-26922832,26923080-26923159,
26923405-26923532
Length = 307
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 30 RYLVSGGTDGVVKVWSLDHIDWHSSLDPVNNTT 128
RYL + +D VK+W++D +L ++TT
Sbjct: 239 RYLATASSDHTVKIWNVDGFKLEKTLVASSDTT 271
>01_06_0303 + 28324155-28325045,28326208-28326321
Length = 334
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 15 ISPCGRYLVSGGTDGVVKVWSL 80
+SP G SGG DGV +W L
Sbjct: 217 VSPDGSLCASGGKDGVTLLWDL 238
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,362,743
Number of Sequences: 37544
Number of extensions: 376770
Number of successful extensions: 1047
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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