Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40125
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   6.0  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 677 VLNLVIFGCYRKYGIYLLG 733
           VL  V+F CY  YGI + G
Sbjct: 142 VLKQVMFLCYSTYGIQVFG 160


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 706 ITAKNNQI*HWFV*VFIGSVGNPFGCL 626
           IT+ NN++  W++   IG +    GCL
Sbjct: 30  ITSTNNEVPRWYICYTIGVI-ITIGCL 55


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 510 YLYYHSVKLFILENKTRNFNIVIFNQI 590
           Y Y+  V + I   K RN N+++  Q+
Sbjct: 158 YTYFLCVIVCIFRGKYRNINLLLTEQL 184


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 333 GKLDALIQFWVIFGYSCSENKTREFFVLLYLIQFIN 440
           G LD+LI   V+        KT+E+  L    Q+I+
Sbjct: 81  GSLDSLILLMVLVSIILGSLKTKEWAKLNNKFQYID 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,987
Number of Sequences: 336
Number of extensions: 4800
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)