Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40125
(751 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 28 0.081
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 24 1.3
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 3.1
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 23 4.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 4.0
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 22 7.1
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 7.1
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 9.3
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 28.3 bits (60), Expect = 0.081
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 190 GWLVAFSIQPHLLYLVWYPHSVHWAR 267
G+L+A +QP L++ +W PH W R
Sbjct: 162 GFLLAGIVQPFLIHWIWTPHG--WMR 185
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 24.2 bits (50), Expect = 1.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 690 LFLAVIGNTEFICWGSH 740
LF+ ++GN+ CW H
Sbjct: 315 LFVGLVGNSAVGCWNEH 331
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 453 CNKIYL*IGLNITIQKTLVFYS 388
C++ YL I NIT+++ +FY+
Sbjct: 227 CDEPYLDITFNITMRRKTLFYT 248
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 453 CNKIYL*IGLNITIQKTLVFYS 388
C++ YL I NIT+++ +FY+
Sbjct: 227 CDEPYLDITFNITMRRKTLFYT 248
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 453 CNKIYL*IGLNITIQKTLVFYS 388
C++ YL I NIT+++ +FY+
Sbjct: 223 CDEPYLDITFNITMRRKTLFYT 244
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 194 GWSHSASSLICSTSYGTHTLYTGRGPLS 277
GW SS++C Y + +T G +S
Sbjct: 532 GWLCGLSSMLCIPGYMIYIWFTTSGTIS 559
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 194 GWSHSASSLICSTSYGTHTLYTGRGPLS 277
GW SS++C Y + +T G +S
Sbjct: 585 GWLCGLSSMLCIPGYMIYIWFTTSGTIS 612
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 423 NITIQKTLVFYSHYMNIQKLPKTESEHPTFHMVLSALLLMY 301
N+T+ + S+Y I L + PT+ L LMY
Sbjct: 628 NVTLSTKCPYPSYYSYIGVLTLVATSMPTYICYLGKAYLMY 668
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.6 bits (46), Expect = 4.0
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +3
Query: 690 LFLAVIGNTEFICWGSH 740
LF ++G+T CW +
Sbjct: 315 LFFGLVGDTSLACWNEN 331
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 208 SIQPHLLYLVWY 243
S+ P +LYL WY
Sbjct: 803 SVIPRILYLTWY 814
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 458 LNAIKSIYKLD*I*QYKKLSCF 393
L+ +KS+Y+ + Q KKL CF
Sbjct: 34 LSDLKSMYESNSEEQMKKLGCF 55
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 143 GGRAALPAAPEIIQNQTRWGERRSPLS 63
GG P I+ ++ W ER P+S
Sbjct: 58 GGVQVSPVQENIVIDKRPWWERYQPIS 84
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 690 LFLAVIGNTEFICWGSHWI 746
LFL ++GN+ C H +
Sbjct: 320 LFLGLVGNSGIACVNEHQV 338
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,838
Number of Sequences: 438
Number of extensions: 5391
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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