Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40124
(560 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 4e-36
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 2e-33
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 138 2e-33
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 138 2e-33
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 125 3e-29
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 72 4e-13
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 48 4e-06
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 44 1e-04
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 35 0.052
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 34 0.091
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 34 0.091
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 31 0.49
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 31 0.85
SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8) 29 2.0
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 29 2.0
SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5) 28 4.5
SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07) 28 6.0
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 28 6.0
SB_51937| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 7.9
SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37) 27 7.9
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 27 7.9
SB_40691| Best HMM Match : Peptidase_C27 (HMM E-Value=1.1) 27 7.9
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 27 7.9
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 27 7.9
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 27 7.9
SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 27 7.9
SB_155| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 7.9
SB_59803| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05) 27 7.9
SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) 27 7.9
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 27 7.9
SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 7.9
SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 7.9
SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05) 27 7.9
SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05) 27 7.9
SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 148 bits (358), Expect = 4e-36
Identities = 83/149 (55%), Positives = 85/149 (57%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 189 QKESTLHLVXXXXXXXXXXXXXITPHPXXXXXXXXXXXXXXXGFXXXXXXXXXXXCXXXX 368
QKESTLHLV P +
Sbjct: 62 QKESTLHLVLRLRGGAKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRREC 121
Query: 369 XXXXXXXGVFMAVMEDRHYCGKCHSTMVF 455
GVFMA DR YCGKC T VF
Sbjct: 122 PSESCGAGVFMASHFDRQYCGKCCLTYVF 150
Score = 57.2 bits (132), Expect = 9e-09
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 245 QEEDYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLQRECTSEQCG 385
++++Y+TP LAVL++YKVDENGKI RL+REC SE CG
Sbjct: 81 KKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRRECPSESCG 127
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 382 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 442 QKESTLHLV 450
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 458 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 518 QKESTLHLV 526
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 138 bits (335), Expect = 2e-33
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 77.8 bits (183), Expect = 6e-15
Identities = 39/68 (57%), Positives = 51/68 (75%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QI VK KT TL+VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R L+DYNI
Sbjct: 78 QISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNI 136
Query: 189 QKESTLHL 212
++ S LHL
Sbjct: 137 KQGSILHL 144
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 125 bits (301), Expect = 3e-29
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGR LSDYNI
Sbjct: 80 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 139
Query: 189 QK 194
QK
Sbjct: 140 QK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +3
Query: 111 IPPNQQRLIFAGKQLEDGRILSDYNIQKESTLHLV 215
IPP+QQRLIFAGKQLEDGR LSDYNIQKESTLHLV
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 36
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 48.4 bits (110), Expect = 4e-06
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
I V TLTG+ I + + P TI VK I+ K G P +QQRL+F G+ L D I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 189 QKESTLHLV 215
+TLHL+
Sbjct: 133 FAGATLHLI 141
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQ---DKEGIPPNQQRLIFAGKQLEDGRILSDY 182
I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L +Y
Sbjct: 69 ITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLKEY 128
Query: 183 NIQKES 200
NI ++S
Sbjct: 129 NIDEKS 134
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 35.5 bits (78), Expect = 0.030
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
++++TLTG L V P +TI +VKAKIQ E
Sbjct: 3 LYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 34.7 bits (76), Expect = 0.052
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYN 185
Q+F T TL +D + +K++I+ K GIP + QRL F K+L D L+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 186 IQK 194
+++
Sbjct: 67 LKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 33.9 bits (74), Expect = 0.091
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 33 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRILSDYNIQKESTLH 209
G TL+V +EN +A ++ + G+P ++ L G QL D + L+ Y++++ +
Sbjct: 10 GSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAYSVKENDVIL 69
Query: 210 LV 215
+V
Sbjct: 70 MV 71
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 33.9 bits (74), Expect = 0.091
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 102 KEGIPPNQQRLIFAGKQLEDGRILSDYN 185
+EGIP +QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 69 TIENVKAKIQDKEGIPPNQQRLIFA-GKQLEDGRILSDYNIQKESTLHL 212
T+ ++K + +K G+ + RL+ GK++ D +L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 30 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQK 194
+G L++ + TIE ++ ++ DK G PP QR I K + L +++
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRE 98
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 31.5 bits (68), Expect = 0.49
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 108 GIPPNQQRLIFAGKQLEDGRILSDYN 185
GIP +QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 30.7 bits (66), Expect = 0.85
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RILSDYNI 188
+ ++T G T+ +E+ ++E++KA+ + + GIP RL LED +I ++
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 189 QK 194
QK
Sbjct: 245 QK 246
>SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8)
Length = 180
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 59 AVRYHRECES*NSRQRGNPSQSTEVDLCWKAAGRWTYPLGLQY 187
+ Y +E E + RQR +S E D+C K R+T Y
Sbjct: 39 STEYTQESEGLDERQRARGKKSFECDICGKCFSRFTITTKYNY 81
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +3
Query: 15 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQK 194
FV G+ ITL P + ++ + G P ++ K LED ++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 195 ESTLHL 212
+TL +
Sbjct: 229 GATLQI 234
>SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5)
Length = 635
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 332 ENGKIHRLQRECTSEQCGRRSVHGGD 409
+ G+IH LQ+EC QC H D
Sbjct: 106 DGGEIHNLQQECIGSQCALYRHHQTD 131
>SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQCGR-RSVHGGDGGPSLLR-EVSQHDG 451
YK D GK+ L+R C S++C + GG + R ++HDG
Sbjct: 515 YKCDNCGKVGHLKRVCQSKECKKXXXXQGGKPKTACHRCGSAEHDG 560
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 568 YKCDNCGKVGHLKRVCQSKEC 588
>SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)
Length = 1105
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 101 QRGNPSQSTEVDLCWKAAGRWTYPLGLQYPEGIHPPPGVEAS 226
QRG S+ T + W+ +G + L IHPP V S
Sbjct: 299 QRGVSSRKTMISKAWQVSGVYHITLDANVTPVIHPPRRVAIS 340
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGR---ILSDYNI 188
V + G+T + P +I +K KI + +QRL++ +L++ + LS++ +
Sbjct: 60 VAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFGV 119
Query: 189 QKESTLHLV 215
+T+ L+
Sbjct: 120 PPYATISLI 128
>SB_51937| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 151
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 127 YKCDNCGKVGHLKRVCQSKEC 147
>SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37)
Length = 493
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 63 YKCDNCGKVGHLKRVCQSKEC 83
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 229 YKCDNCGKVGHLKRVCQSKEC 249
>SB_40691| Best HMM Match : Peptidase_C27 (HMM E-Value=1.1)
Length = 406
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -1
Query: 443 AVTLPAVVTVLHHRHEHSGGRTVRLCTRAADG 348
A+ + ++LH +H+H +TV C + G
Sbjct: 3 AIVFSSCTSILHSKHKHYREKTVEKCRKTTGG 34
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 27 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 158
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
Length = 856
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 372 YKCDNCGKVGHLKRVCQSKEC 392
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 27.5 bits (58), Expect = 7.9
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1
Query: 428 AVVTVLHHRHEH 393
A++TV+HHRH H
Sbjct: 525 AIITVIHHRHHH 536
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 898 YKCDNCGKVGHLKRVCQSKEC 918
>SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 794
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 364 YKCDNCGKVGHLKRVCQSKEC 384
>SB_155| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 296
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 229 YKCDNCGKVGHLKRVCQSKEC 249
>SB_59803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 64 QIPSRM*KLKFKTKRESLPINRG*SLLESSWKMDVSSRTTIS 189
QIP M L ++ + E+ P+N +LL+ SW + + + T S
Sbjct: 124 QIPP-MKDLVYEPREENFPLNSNPALLKVSWTVGIDNWVTAS 164
>SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05)
Length = 403
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 229 YKCDNCGKVGHLKRVCQSKEC 249
>SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37)
Length = 1122
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 245 YKCDNCGKVGHLKRVCQSKEC 265
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 207 YKCDNCGKVGHLKRVCQSKEC 227
>SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 342
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 202 YKCDNCGKVGHLKRVCQSKEC 222
>SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 369
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 229 YKCDNCGKVGHLKRVCQSKEC 249
>SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05)
Length = 415
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 66 YKCDNCGKVGHLKRVCQSKEC 86
>SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05)
Length = 717
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 268 YKCDNCGKVGHLKRVCQSKEC 288
>SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 320 YKVDENGKIHRLQRECTSEQC 382
YK D GK+ L+R C S++C
Sbjct: 428 YKCDNCGKVGHLKRVCQSKEC 448
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,628,071
Number of Sequences: 59808
Number of extensions: 377348
Number of successful extensions: 3257
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 3157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3256
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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