Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40124
(560 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 151 2e-37
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 146 9e-36
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 146 9e-36
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 133 9e-32
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 133 9e-32
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 133 9e-32
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 133 9e-32
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 133 9e-32
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 133 9e-32
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 133 9e-32
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 133 9e-32
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 133 9e-32
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 133 9e-32
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 133 9e-32
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 133 9e-32
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 133 9e-32
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 133 9e-32
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 133 9e-32
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 133 9e-32
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 133 9e-32
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 132 2e-31
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 131 3e-31
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 125 2e-29
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 107 4e-24
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 81 7e-16
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 64 5e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 63 1e-10
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 59 2e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 50 8e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 50 1e-06
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 50 1e-06
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 48 4e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 46 2e-05
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 46 2e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 46 2e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 46 2e-05
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 45 3e-05
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 45 3e-05
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 45 3e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 45 3e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 45 3e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 45 3e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 44 7e-05
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 44 7e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 44 7e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 42 3e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 41 5e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 41 7e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 40 9e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 40 9e-04
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 39 0.002
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 39 0.002
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 38 0.003
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 38 0.005
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 37 0.008
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 37 0.011
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 37 0.011
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.032
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 35 0.032
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 35 0.032
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 33 0.099
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 33 0.099
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.13
At1g11970.1 68414.m01383 hypothetical protein 32 0.23
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 30 0.92
At1g47680.1 68414.m05297 hypothetical protein 29 1.6
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 29 2.8
At5g12280.1 68418.m01444 hypothetical protein 28 3.7
At3g21700.3 68416.m02737 expressed protein 28 4.9
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 27 8.6
At2g41820.1 68415.m05168 leucine-rich repeat transmembrane prote... 27 8.6
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 151 bits (367), Expect = 2e-37
Identities = 83/154 (53%), Positives = 88/154 (57%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLVXXXXXXXXXXXXXITPHPXXXXXXXXXXXXXXXGFXXXXXXXXXXXCXXXX 368
QKESTLHLV P F
Sbjct: 62 QKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKEC 121
Query: 369 XXXXXXXGVFMAVMEDRHYCGKCHSTMVFKDDDK 470
G FMA DRHYCGKC +T VFK D+
Sbjct: 122 PSVSCGPGTFMASHFDRHYCGKCGTTYVFKKADE 155
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 245 QEEDYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLQRECTSEQCG 385
+++ Y+ P LAVL+FYKVD +GK+ RL++EC S CG
Sbjct: 81 KKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPSVSCG 127
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 146 bits (354), Expect = 9e-36
Identities = 80/152 (52%), Positives = 86/152 (56%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLVXXXXXXXXXXXXXITPHPXXXXXXXXXXXXXXXGFXXXXXXXXXXXCXXXX 368
QKESTLHLV P F
Sbjct: 62 QKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKEC 121
Query: 369 XXXXXXXGVFMAVMEDRHYCGKCHSTMVFKDD 464
G FMA DRHYCGKC T V++ +
Sbjct: 122 PNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 245 QEEDYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLQRECTSEQCG 385
+++ Y+ P LAVL+FYK+D +GK+ RL++EC + CG
Sbjct: 81 KKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKECPNATCG 127
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 146 bits (354), Expect = 9e-36
Identities = 80/152 (52%), Positives = 86/152 (56%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLVXXXXXXXXXXXXXITPHPXXXXXXXXXXXXXXXGFXXXXXXXXXXXCXXXX 368
QKESTLHLV P F
Sbjct: 62 QKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKEC 121
Query: 369 XXXXXXXGVFMAVMEDRHYCGKCHSTMVFKDD 464
G FMA DRHYCGKC T V++ +
Sbjct: 122 PNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 245 QEEDYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLQRECTSEQCG 385
+++ Y+ P LAVL+FYKVD +GK+ RL++EC + CG
Sbjct: 81 KKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKECPNATCG 127
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 85 KLKFKTKRESLPINRG*SLLESSWKMDVSSRTTISRRNPPSTWC*GFVV 231
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 303
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 382 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 85 KLKFKTKRESLPINRG*SLLESSWKMDVSSRTTISRRNPPSTWC*GFVV 231
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 85 KLKFKTKRESLPINRG*SLLESSWKMDVSSRTTISRRNPPSTWC*GFVV 231
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 382 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 85 KLKFKTKRESLPINRG*SLLESSWKMDVSSRTTISRRNPPSTWC*GFVV 231
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 85 KLKFKTKRESLPINRG*SLLESSWKMDVSSRTTISRRNPPSTWC*GFVV 231
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/68 (58%), Positives = 53/68 (77%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQ 191
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D + DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 192 KESTLHLV 215
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 130 bits (313), Expect = 8e-31
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 153 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNI 212
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 213 QKESTLHLV 221
Score = 126 bits (303), Expect = 1e-29
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+D NI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NI 136
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 137 QKESTLHLV 145
Score = 97.1 bits (231), Expect = 7e-21
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 164
QIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 229 QIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 133 bits (321), Expect = 9e-32
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQ 191
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D + DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 192 KESTLHLV 215
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 132 bits (318), Expect = 2e-31
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 127 bits (306), Expect = 6e-30
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGR L+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNI 213
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 117 bits (282), Expect = 5e-27
Identities = 55/69 (79%), Positives = 63/69 (91%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGR L+DYN+
Sbjct: 2 QIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNV 61
Query: 189 QKESTLHLV 215
Q++STLHL+
Sbjct: 62 QEDSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 131 bits (317), Expect = 3e-31
Identities = 62/69 (89%), Positives = 67/69 (97%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGR L+DYNI
Sbjct: 80 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNI 139
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 140 QKESTLHLV 148
Score = 124 bits (300), Expect = 3e-29
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGR L+DYNI
Sbjct: 156 QIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 215
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 216 QKESTLHLV 224
Score = 116 bits (278), Expect = 1e-26
Identities = 59/70 (84%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RILSDYN 185
QIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG L+DYN
Sbjct: 232 QIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYN 291
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 292 IQKESTLHLV 301
Score = 100 bits (239), Expect = 8e-22
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QI KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGR L+DY+I
Sbjct: 4 QIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSI 63
Query: 189 QKESTLHL 212
QK+S LHL
Sbjct: 64 QKDSILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 125 bits (302), Expect = 2e-29
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGR L+DYNI
Sbjct: 80 QIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNI 139
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 140 QKESTLHLV 148
Score = 114 bits (275), Expect = 3e-26
Identities = 56/69 (81%), Positives = 62/69 (89%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG L+DYNI
Sbjct: 4 QIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNI 63
Query: 189 QKESTLHLV 215
QKESTLHLV
Sbjct: 64 QKESTLHLV 72
Score = 102 bits (244), Expect = 2e-22
Identities = 51/69 (73%), Positives = 57/69 (82%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG L DY+I
Sbjct: 553 QIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDI 612
Query: 189 QKESTLHLV 215
K+STL+LV
Sbjct: 613 HKKSTLYLV 621
Score = 101 bits (243), Expect = 2e-22
Identities = 53/71 (74%), Positives = 58/71 (81%), Gaps = 2/71 (2%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPNQQRLIFAGKQLEDGRILSDY 182
QIFVKTLT K I LEVE DTIENVKA +QDKEGI PN QRLIF GK+L+DG L+DY
Sbjct: 320 QIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADY 379
Query: 183 NIQKESTLHLV 215
+IQKESTLHLV
Sbjct: 380 SIQKESTLHLV 390
Score = 97.5 bits (232), Expect = 5e-21
Identities = 48/68 (70%), Positives = 54/68 (79%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
QIFVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGR L DYNI
Sbjct: 394 QIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNI 453
Query: 189 QKESTLHL 212
+ ESTLHL
Sbjct: 454 RNESTLHL 461
Score = 88.2 bits (209), Expect = 3e-18
Identities = 48/73 (65%), Positives = 54/73 (73%), Gaps = 5/73 (6%)
Frame = +3
Query: 12 IFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILS 176
IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE GR L+
Sbjct: 240 IFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLA 299
Query: 177 DYNIQKESTLHLV 215
YNIQK STL+LV
Sbjct: 300 HYNIQKGSTLYLV 312
Score = 84.6 bits (200), Expect = 4e-17
Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 7/75 (9%)
Frame = +3
Query: 9 QIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDGR 167
QIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED R
Sbjct: 156 QIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNR 215
Query: 168 ILSDYNIQKESTLHL 212
L+DY I+ STL L
Sbjct: 216 TLADYGIRNRSTLCL 230
Score = 84.2 bits (199), Expect = 5e-17
Identities = 47/74 (63%), Positives = 52/74 (70%), Gaps = 7/74 (9%)
Frame = +3
Query: 9 QIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGR 167
QIFVKT T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L R
Sbjct: 470 QIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSR 529
Query: 168 ILSDYNIQKESTLH 209
L DYNIQK ST+H
Sbjct: 530 TLLDYNIQKGSTIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 107 bits (258), Expect = 4e-24
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQ 191
IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG L+DYNIQ
Sbjct: 88 IFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQ 147
Query: 192 KESTLHLV 215
+S LHL+
Sbjct: 148 NDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 80.6 bits (190), Expect = 7e-16
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D YN+
Sbjct: 2 EIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNL 61
Query: 189 QKESTLHLV 215
++ S LHLV
Sbjct: 62 ERGSVLHLV 70
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 149
IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 52 IFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ +SDYNI
Sbjct: 142 RIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNI 201
Query: 189 QKESTL 206
+ ++ L
Sbjct: 202 KPDANL 207
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y++
Sbjct: 25 ELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHL 84
Query: 189 QKESTLHLV 215
+ TLHL+
Sbjct: 85 ENGHTLHLI 93
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +3
Query: 3 KXQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSD 179
+ QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ L+
Sbjct: 94 RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTY 153
Query: 180 YNIQKESTLHLV 215
Y+I+++++L LV
Sbjct: 154 YSIEQDASLQLV 165
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 50.4 bits (115), Expect = 8e-07
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRILSDY 182
+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D L +
Sbjct: 2 KIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEEN 61
Query: 183 NIQKES 200
N+ + S
Sbjct: 62 NVVENS 67
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQKE 197
++ G +++ T+E+ K + +P NQQRLI+ G+ L+D + L Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 198 STLHLV 215
T+H+V
Sbjct: 82 HTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQKE 197
V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D + L Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 198 STLHLV 215
T+H+V
Sbjct: 82 HTVHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQ 191
+++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I
Sbjct: 3 VYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMIL 62
Query: 192 KESTLHL 212
ES L L
Sbjct: 63 FESRLLL 69
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRILSDYN 185
+I +K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY+
Sbjct: 12 RIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYH 71
Query: 186 IQKESTLHLV 215
+++ TL+LV
Sbjct: 72 VEEGHTLYLV 81
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/69 (30%), Positives = 42/69 (60%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS +
Sbjct: 2 RITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGV 61
Query: 189 QKESTLHLV 215
+ + L ++
Sbjct: 62 KDDDLLMMM 70
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRILSDYNIQ 191
VKT GK VE I VK +I K G + P++Q +++ G++LED +++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 192 KESTLHLV 215
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRILSDYNIQ 191
VKT GK VE I VK +I K G + P++Q +++ G++LED +++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 192 KESTLHLV 215
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQKE 197
+ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I E
Sbjct: 5 IDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFE 64
Query: 198 STL 206
S L
Sbjct: 65 SLL 67
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRILSD 179
+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D + +
Sbjct: 2 KIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEE 61
Query: 180 YNIQKES 200
+ + S
Sbjct: 62 NKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRILSD 179
+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D + +
Sbjct: 2 KIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEE 61
Query: 180 YNIQKES 200
+ + S
Sbjct: 62 NKVAENS 68
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRILSD 179
++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 180 YNIQKESTL 206
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRILSD 179
++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 180 YNIQKESTL 206
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRILSD 179
++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 180 YNIQKESTL 206
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 44.0 bits (99), Expect = 7e-05
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQKE 197
V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++I +
Sbjct: 5 VENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQN 64
Query: 198 STLHL 212
LHL
Sbjct: 65 PLLHL 69
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 44.0 bits (99), Expect = 7e-05
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYN 185
Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S
Sbjct: 10 QFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS--- 66
Query: 186 IQKESTLHLV 215
Q ++T++LV
Sbjct: 67 -QPDATVNLV 75
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 44.0 bits (99), Expect = 7e-05
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRILSD 179
++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVE 61
Query: 180 YNIQKESTL 206
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRILSDYN 185
+I VK+L GK L V +++ +++AK K + ++ + GK+L+D + L+ N
Sbjct: 662 KIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQN 721
Query: 186 IQKESTLHLV 215
+Q S +HL+
Sbjct: 722 VQPNSLVHLI 731
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQ 191
+F +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D + I
Sbjct: 3 VFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVIL 62
Query: 192 KESTLHL 212
S + L
Sbjct: 63 NHSRIQL 69
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 40.7 bits (91), Expect = 7e-04
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRILSDY 182
I V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R+++D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 183 NIQKESTLHLV 215
++ +HL+
Sbjct: 170 CQNGDNVIHLL 180
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 40.3 bits (90), Expect = 9e-04
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRILSDYN 185
+I + L GK L V +++ ++KAK K + ++ + GK+LED + L++ N
Sbjct: 501 KIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQN 560
Query: 186 IQKESTLHLV 215
+Q S +HL+
Sbjct: 561 VQPNSLVHLL 570
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 40.3 bits (90), Expect = 9e-04
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +3
Query: 33 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNIQKESTLHL 212
GK+I L V P T++++K+++Q + P Q+LIF GK L + L ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 213 V 215
+
Sbjct: 604 M 604
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK---QLEDGRILSD 179
Q+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G + D
Sbjct: 2 QVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDD 61
Query: 180 YNIQKESTLHL 212
Y I+ H+
Sbjct: 62 YKIKACDIFHM 72
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYN 185
Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ +S
Sbjct: 10 QFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS--- 66
Query: 186 IQKESTLHLV 215
Q ++T++LV
Sbjct: 67 -QSDTTMNLV 75
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 161
++ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D
Sbjct: 3 KVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQD 53
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 161
+ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D
Sbjct: 38 VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQD 87
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 119
IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 51 IFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 36.7 bits (81), Expect = 0.011
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRILSD 179
+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D +
Sbjct: 2 KIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTMEA 61
Query: 180 YNIQKESTLHLV 215
+ +S + ++
Sbjct: 62 NKVFDKSVIAII 73
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 161
+F +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 3 VFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 35.1 bits (77), Expect = 0.032
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 48 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRIL 173
L +E + T +K + G+ P QQRL+F GK+ ED L
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKEREDHEYL 124
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 35.1 bits (77), Expect = 0.032
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 146
V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 5 VEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 35.1 bits (77), Expect = 0.032
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 146
+ V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 2 KFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 33.5 bits (73), Expect = 0.099
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRILSDYN 185
+ V T GK V+ + +K +I ++ +G P + Q ++F G++L+D RI+
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 186 IQKESTLHLV 215
S +HL+
Sbjct: 173 KDGNSVIHLL 182
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 33.5 bits (73), Expect = 0.099
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 3 KXQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 161
+ ++FV+T TG + LE++ SD VK K+Q P + L F L++
Sbjct: 40 RRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKN 92
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRIL 173
V T++ + + ++ + T +K I GI +QRL+F GK+ ED L
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKEREDREYL 134
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 27 LTGKTITLEVEPSDTIENVKAKIQDKEGIP 116
L+ K I +E++P D IE +K I+++ GIP
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 30.3 bits (65), Expect = 0.92
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 48 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLED 161
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKD 52
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 57 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRILSDYNIQKESTLHL 212
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 63 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
S+ + ++K KI + IP N+Q+L L+D L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 36 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRILSDYNI 188
K + + V+ S+ + ++K KI + P N+Q+L L+D L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At3g21700.3 68416.m02737 expressed protein
Length = 292
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 410 GGPSLLREVSQHDGLQRRRQINKSPLACKEPLALLCMMD 526
GG + + + +G +R R ++ P+ACK+ +A+L M D
Sbjct: 152 GGARISYSIWELEGAERSR--DQIPVACKDSVAILFMFD 188
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 215 HQVEGGF--LLDIVVREDTSIFQLLSSKDQPLLIGRDSLFVL 96
H V+G LLD VR T +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At2g41820.1 68415.m05168 leucine-rich repeat transmembrane protein
kinase, putative
Length = 890
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -1
Query: 191 LDIVVREDTSIFQLLSSKDQPLLIGRDSLFVLNFSFHILDG 69
LD +V D S LL+ PLL G SL +NFS ++L+G
Sbjct: 446 LDKLVSLDVSN-NLLTGSIPPLLKGMMSLIEVNFSNNLLNG 485
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,330,451
Number of Sequences: 28952
Number of extensions: 259893
Number of successful extensions: 868
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -