BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV40123 (703 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 171 6e-44 SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 171 8e-44 SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 171 8e-44 SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 100 4e-22 SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 95 1e-20 SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 74 2e-14 SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.007 SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.007 SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 34 0.017 SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.017 SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.030 SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 32 0.069 SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.21 SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.28 SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.49 SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 29 0.64 SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 29 0.64 SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 27 3.4 SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.4 SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 4.5 SPAC31G5.17c |rps1001|rps10-1|40S ribosomal protein S10|Schizosa... 26 6.0 SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyc... 26 6.0 SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 26 6.0 SPBP22H7.08 |rps1002|rps10-2, rps10B|40S ribosomal protein S10|S... 25 7.9 >SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual Length = 460 Score = 171 bits (417), Expect = 6e-44 Identities = 84/120 (70%), Positives = 93/120 (77%) Frame = +1 Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435 ITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+ Sbjct: 71 ITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKD 130 Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKPSCCRF 615 GQTREHALLA+TLGVKQLIV VNK + KE S++IKK+G+ P F Sbjct: 131 GQTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF 188 Score = 141 bits (341), Expect = 1e-34 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +3 Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 228 DKLKAERE 251 DKLKAERE Sbjct: 61 DKLKAERE 68 Score = 56.0 bits (129), Expect = 5e-09 Identities = 20/35 (57%), Positives = 28/35 (80%) Frame = +2 Query: 581 RRLATNPAAVAFVPISGWHGDNMLEPSTKMPWFQG 685 +++ NP V FVP+SG+ GDNM+EP+T MPW+QG Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQG 211 >SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual Length = 460 Score = 171 bits (416), Expect = 8e-44 Identities = 83/120 (69%), Positives = 93/120 (77%) Frame = +1 Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435 ITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+ Sbjct: 71 ITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKD 130 Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKPSCCRF 615 GQTREHALLA+TLGVKQLIV VNK + KE S++IKK+G+ P F Sbjct: 131 GQTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF 188 Score = 141 bits (341), Expect = 1e-34 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +3 Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 228 DKLKAERE 251 DKLKAERE Sbjct: 61 DKLKAERE 68 Score = 56.0 bits (129), Expect = 5e-09 Identities = 20/35 (57%), Positives = 28/35 (80%) Frame = +2 Query: 581 RRLATNPAAVAFVPISGWHGDNMLEPSTKMPWFQG 685 +++ NP V FVP+SG+ GDNM+EP+T MPW+QG Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQG 211 >SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 171 bits (416), Expect = 8e-44 Identities = 83/120 (69%), Positives = 93/120 (77%) Frame = +1 Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435 ITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+ Sbjct: 71 ITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKD 130 Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKPSCCRF 615 GQTREHALLA+TLGVKQLIV VNK + KE S++IKK+G+ P F Sbjct: 131 GQTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF 188 Score = 141 bits (341), Expect = 1e-34 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +3 Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 228 DKLKAERE 251 DKLKAERE Sbjct: 61 DKLKAERE 68 Score = 56.0 bits (129), Expect = 5e-09 Identities = 20/35 (57%), Positives = 28/35 (80%) Frame = +2 Query: 581 RRLATNPAAVAFVPISGWHGDNMLEPSTKMPWFQG 685 +++ NP V FVP+SG+ GDNM+EP+T MPW+QG Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQG 211 >SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 592 Score = 99.5 bits (237), Expect = 4e-22 Identities = 56/122 (45%), Positives = 74/122 (60%), Gaps = 2/122 (1%) Frame = +1 Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435 +T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +N Sbjct: 241 VTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLEN 300 Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPD-LRKFKKEVSSY-IKKIGYKPSCC 609 GQTREHA L LG+ +++V VNK L+ + S D ++ K VS + IK +G+K S Sbjct: 301 GQTREHAYLLRALGISEIVVSVNK---LDLMSWSEDRFQEIKNIVSDFLIKMVGFKTSNV 357 Query: 610 RF 615 F Sbjct: 358 HF 359 Score = 72.5 bits (170), Expect = 5e-14 Identities = 31/63 (49%), Positives = 44/63 (69%) Frame = +3 Query: 60 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 239 K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234 Query: 240 AER 248 ER Sbjct: 235 EER 237 >SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 94.7 bits (225), Expect = 1e-20 Identities = 41/83 (49%), Positives = 58/83 (69%) Frame = +1 Query: 259 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 438 T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + G Sbjct: 303 TVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGG 362 Query: 439 QTREHALLAFTLGVKQLIVGVNK 507 QTREHA+LA T G+ L+V +NK Sbjct: 363 QTREHAVLARTQGINHLVVVINK 385 Score = 80.6 bits (190), Expect = 2e-16 Identities = 35/64 (54%), Positives = 47/64 (73%) Frame = +3 Query: 60 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 239 K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295 Query: 240 AERE 251 ERE Sbjct: 296 EERE 299 >SPBC9B6.04c |tuf1||mitochondrial translation elongation factor EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 439 Score = 73.7 bits (173), Expect = 2e-14 Identities = 38/84 (45%), Positives = 54/84 (64%) Frame = +1 Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435 ITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ Sbjct: 102 ITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP------ 155 Query: 436 GQTREHALLAFTLGVKQLIVGVNK 507 QTREH LLA +GVKQ++V +NK Sbjct: 156 -QTREHLLLARQVGVKQIVVYINK 178 Score = 35.1 bits (77), Expect = 0.010 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +3 Query: 54 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 140 ++K H+NI IGHVD GK+T T I KC Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76 >SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 842 Score = 35.5 bits (78), Expect = 0.007 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +3 Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 143 MGK N+ VI HVD GKST T L+ K G Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44 Score = 27.9 bits (59), Expect = 1.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 298 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 393 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elongation factor 2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 842 Score = 35.5 bits (78), Expect = 0.007 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +3 Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 143 MGK N+ VI HVD GKST T L+ K G Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44 Score = 27.9 bits (59), Expect = 1.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 298 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 393 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma subunit|Schizosaccharomyces pombe|chr 2|||Manual Length = 446 Score = 34.3 bits (75), Expect = 0.017 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +1 Query: 301 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 480 +V+ +D PGH + M+ G + D A+L++A QT EH + + Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162 Query: 481 KQLIVGVNK 507 K +I+ NK Sbjct: 163 KHIIILQNK 171 >SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 770 Score = 34.3 bits (75), Expect = 0.017 Identities = 21/57 (36%), Positives = 29/57 (50%) Frame = +1 Query: 283 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 453 FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R + Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196 Score = 29.1 bits (62), Expect = 0.64 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 72 NIVVIGHVDSGKSTTTGHLIYKCGGI 149 NI + H+DSGK+T T ++Y G I Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86 >SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual Length = 686 Score = 33.5 bits (73), Expect = 0.030 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 283 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408 F+ ++T +D PGH F G + AD VL+VA G Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256 >SPBC660.10 |||translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 813 Score = 32.3 bits (70), Expect = 0.069 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408 ITI+ A F + +ID PGH DF + + D AV I+ G Sbjct: 79 ITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129 Score = 28.7 bits (61), Expect = 0.85 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +3 Query: 72 NIVVIGHVDSGKSTTTGHLIYKCG 143 N+ +I H+D+GK+T T ++Y G Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53 >SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 646 Score = 30.7 bits (66), Expect = 0.21 Identities = 12/45 (26%), Positives = 23/45 (51%) Frame = +1 Query: 274 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408 ++ + Y + +ID PGH DF ++ + + +L+V A G Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160 >SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1000 Score = 30.3 bits (65), Expect = 0.28 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 298 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408 Y + +ID+PGH DF + + + D A ++V A G Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130 >SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1079 Score = 29.5 bits (63), Expect = 0.49 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 310 IIDAPGHRDFIKNMITGTSQADCAVLIV 393 IID PGH F GTS + A+L++ Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580 >SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces pombe|chr 2|||Manual Length = 983 Score = 29.1 bits (62), Expect = 0.64 Identities = 13/51 (25%), Positives = 25/51 (49%) Frame = +1 Query: 241 LSVSRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 393 +S+ + +A+ + + ID PGH DF+ + + +D VL+V Sbjct: 190 MSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240 >SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pombe|chr 2|||Manual Length = 662 Score = 29.1 bits (62), Expect = 0.64 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = -2 Query: 291 SFELPESNIDCDTTHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSNDQWW 112 S L N D + + V +PK I I++ F P S S C+Y S+D W Sbjct: 12 SSNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSW 71 Query: 111 WT 106 T Sbjct: 72 RT 73 >SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 579 Score = 26.6 bits (56), Expect = 3.4 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = +3 Query: 81 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERESYH 260 ++ V+S +ST G +D T+E + ++ +G +Y W++ K+ ER Y Sbjct: 460 LVYRVNSAQSTAAG---LGPVSLDSNTLENVD--VGDLVEGHLQYRWLVAKILKERLGYD 514 Query: 261 N 263 N Sbjct: 515 N 515 >SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr 2|||Manual Length = 577 Score = 26.6 bits (56), Expect = 3.4 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -1 Query: 574 MRILPS*ISSNLGSLYGGSVES 509 +R++P I S+LGSL GG+V S Sbjct: 389 IRLIPMIIGSSLGSLLGGAVIS 410 >SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1|||Manual Length = 380 Score = 26.2 bits (55), Expect = 4.5 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = +1 Query: 256 ITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 348 + I+I + E +++ T+ID PG DFI N Sbjct: 71 VEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103 >SPAC31G5.17c |rps1001|rps10-1|40S ribosomal protein S10|Schizosaccharomyces pombe|chr 1|||Manual Length = 144 Score = 25.8 bits (54), Expect = 6.0 Identities = 14/48 (29%), Positives = 20/48 (41%) Frame = -2 Query: 681 WNQGILVEGSNMLSPCHPEMGTKATAAGFVANLLDV*GYFLLEFPQIW 538 ++QG+LV + P HPE+G LD GY + W Sbjct: 16 FSQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGW 63 >SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyces pombe|chr 1|||Manual Length = 431 Score = 25.8 bits (54), Expect = 6.0 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -2 Query: 693 PAIPWNQGILVEGSNM 646 P W++G+L+ GSNM Sbjct: 43 PTFSWHEGMLIPGSNM 58 >SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces pombe|chr 1|||Manual Length = 1564 Score = 25.8 bits (54), Expect = 6.0 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = -3 Query: 566 TSFLNFLKSGLTVWWFSGILLFTPTMSCLTPR 471 T LNF ++ + +LL PT +CLT + Sbjct: 445 TRLLNFARARFPFEYSQFVLLLIPTFACLTSK 476 >SPBP22H7.08 |rps1002|rps10-2, rps10B|40S ribosomal protein S10|Schizosaccharomyces pombe|chr 2|||Manual Length = 147 Score = 25.4 bits (53), Expect = 7.9 Identities = 14/48 (29%), Positives = 19/48 (39%) Frame = -2 Query: 681 WNQGILVEGSNMLSPCHPEMGTKATAAGFVANLLDV*GYFLLEFPQIW 538 + QG+LV + P HPE+G LD GY + W Sbjct: 16 FQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGW 63 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,995,172 Number of Sequences: 5004 Number of extensions: 63498 Number of successful extensions: 232 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 206 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 228 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 325165428 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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