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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40123
         (703 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef...   171   6e-44
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef...   171   8e-44
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef...   171   8e-44
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote...   100   4e-22
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa...    95   1e-20
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E...    74   2e-14
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...    36   0.007
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...    36   0.007
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su...    34   0.017
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz...    34   0.017
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch...    33   0.030
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce...    32   0.069
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po...    31   0.21 
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...    30   0.28 
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    29   0.49 
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    29   0.64 
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb...    29   0.64 
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c...    27   3.4  
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch...    27   3.4  
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||...    26   4.5  
SPAC31G5.17c |rps1001|rps10-1|40S ribosomal protein S10|Schizosa...    26   6.0  
SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyc...    26   6.0  
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po...    26   6.0  
SPBP22H7.08 |rps1002|rps10-2, rps10B|40S ribosomal protein S10|S...    25   7.9  

>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
           Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score =  171 bits (417), Expect = 6e-44
 Identities = 84/120 (70%), Positives = 93/120 (77%)
 Frame = +1

Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
           ITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+  GTGEFEAGISK+
Sbjct: 71  ITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKD 130

Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKPSCCRF 615
           GQTREHALLA+TLGVKQLIV VNK              +  KE S++IKK+G+ P    F
Sbjct: 131 GQTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF 188



 Score =  141 bits (341), Expect = 1e-34
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
           MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60

Query: 228 DKLKAERE 251
           DKLKAERE
Sbjct: 61  DKLKAERE 68



 Score = 56.0 bits (129), Expect = 5e-09
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = +2

Query: 581 RRLATNPAAVAFVPISGWHGDNMLEPSTKMPWFQG 685
           +++  NP  V FVP+SG+ GDNM+EP+T MPW+QG
Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQG 211


>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
           Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 460

 Score =  171 bits (416), Expect = 8e-44
 Identities = 83/120 (69%), Positives = 93/120 (77%)
 Frame = +1

Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
           ITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+  GTGEFEAGISK+
Sbjct: 71  ITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKD 130

Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKPSCCRF 615
           GQTREHALLA+TLGVKQLIV VNK              +  KE S++IKK+G+ P    F
Sbjct: 131 GQTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF 188



 Score =  141 bits (341), Expect = 1e-34
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
           MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60

Query: 228 DKLKAERE 251
           DKLKAERE
Sbjct: 61  DKLKAERE 68



 Score = 56.0 bits (129), Expect = 5e-09
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = +2

Query: 581 RRLATNPAAVAFVPISGWHGDNMLEPSTKMPWFQG 685
           +++  NP  V FVP+SG+ GDNM+EP+T MPW+QG
Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQG 211


>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
           Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score =  171 bits (416), Expect = 8e-44
 Identities = 83/120 (69%), Positives = 93/120 (77%)
 Frame = +1

Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
           ITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+  GTGEFEAGISK+
Sbjct: 71  ITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKD 130

Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPDLRKFKKEVSSYIKKIGYKPSCCRF 615
           GQTREHALLA+TLGVKQLIV VNK              +  KE S++IKK+G+ P    F
Sbjct: 131 GQTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF 188



 Score =  141 bits (341), Expect = 1e-34
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
           MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60

Query: 228 DKLKAERE 251
           DKLKAERE
Sbjct: 61  DKLKAERE 68



 Score = 56.0 bits (129), Expect = 5e-09
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = +2

Query: 581 RRLATNPAAVAFVPISGWHGDNMLEPSTKMPWFQG 685
           +++  NP  V FVP+SG+ GDNM+EP+T MPW+QG
Sbjct: 177 KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQG 211


>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score = 99.5 bits (237), Expect = 4e-22
 Identities = 56/122 (45%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
 Frame = +1

Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
           +T+D+A   FE+ K    I DAPGHRDFI  MI G S AD AVL+V +    FE G  +N
Sbjct: 241 VTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLEN 300

Query: 436 GQTREHALLAFTLGVKQLIVGVNKRIPLNHHTVSPD-LRKFKKEVSSY-IKKIGYKPSCC 609
           GQTREHA L   LG+ +++V VNK   L+  + S D  ++ K  VS + IK +G+K S  
Sbjct: 301 GQTREHAYLLRALGISEIVVSVNK---LDLMSWSEDRFQEIKNIVSDFLIKMVGFKTSNV 357

Query: 610 RF 615
            F
Sbjct: 358 HF 359



 Score = 72.5 bits (170), Expect = 5e-14
 Identities = 31/63 (49%), Positives = 44/63 (69%)
 Frame = +3

Query: 60  KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 239
           K  +++VV GHVDSGKST  G ++++ G I+ R+++K   EA   GKGSF YAW+LD  +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234

Query: 240 AER 248
            ER
Sbjct: 235 EER 237


>SPCC584.04 |sup35|erf3|translation release factor eRF3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 94.7 bits (225), Expect = 1e-20
 Identities = 41/83 (49%), Positives = 58/83 (69%)
 Frame = +1

Query: 259 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 438
           T+++    FET     +++DAPGH+ ++ NMI G SQAD  VL+++A  GEFEAG  + G
Sbjct: 303 TVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGG 362

Query: 439 QTREHALLAFTLGVKQLIVGVNK 507
           QTREHA+LA T G+  L+V +NK
Sbjct: 363 QTREHAVLARTQGINHLVVVINK 385



 Score = 80.6 bits (190), Expect = 2e-16
 Identities = 35/64 (54%), Positives = 47/64 (73%)
 Frame = +3

Query: 60  KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 239
           K H+NIV IGHVD+GKST  G++++  G +DKRT+EK E+EA+E GK S+  +W LD   
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295

Query: 240 AERE 251
            ERE
Sbjct: 296 EERE 299


>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
           EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 439

 Score = 73.7 bits (173), Expect = 2e-14
 Identities = 38/84 (45%), Positives = 54/84 (64%)
 Frame = +1

Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 435
           ITI  A  ++ET+  +   +D PGH D+IKNMITG +  D A+++V+A  G+        
Sbjct: 102 ITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP------ 155

Query: 436 GQTREHALLAFTLGVKQLIVGVNK 507
            QTREH LLA  +GVKQ++V +NK
Sbjct: 156 -QTREHLLLARQVGVKQIVVYINK 178



 Score = 35.1 bits (77), Expect = 0.010
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +3

Query: 54  KEKTHINIVVIGHVDSGKSTTTGHLIYKC 140
           ++K H+NI  IGHVD GK+T T   I KC
Sbjct: 49  RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76


>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score = 35.5 bits (78), Expect = 0.007
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 143
           MGK     N+ VI HVD GKST T  L+ K G
Sbjct: 13  MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44



 Score = 27.9 bits (59), Expect = 1.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 298 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 393
           + V +ID+PGH DF   +       D A+++V
Sbjct: 98  FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score = 35.5 bits (78), Expect = 0.007
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 143
           MGK     N+ VI HVD GKST T  L+ K G
Sbjct: 13  MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44



 Score = 27.9 bits (59), Expect = 1.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 298 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 393
           + V +ID+PGH DF   +       D A+++V
Sbjct: 98  FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 446

 Score = 34.3 bits (75), Expect = 0.017
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = +1

Query: 301 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 480
           +V+ +D PGH   +  M+ G +  D A+L++A              QT EH      + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162

Query: 481 KQLIVGVNK 507
           K +I+  NK
Sbjct: 163 KHIIILQNK 171


>SPBC1306.01c ||SPBC409.22c|translation elongation factor
           G|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 770

 Score = 34.3 bits (75), Expect = 0.017
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +1

Query: 283 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 453
           FE S Y + IID PGH DF   +       D AVL++ A +G     I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196



 Score = 29.1 bits (62), Expect = 0.64
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 72  NIVVIGHVDSGKSTTTGHLIYKCGGI 149
           NI +  H+DSGK+T T  ++Y  G I
Sbjct: 61  NIGISAHIDSGKTTFTERVLYYTGRI 86


>SPBC1271.15c |||translation initiation factor
           IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 33.5 bits (73), Expect = 0.030
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 283 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
           F+    ++T +D PGH  F      G + AD  VL+VA   G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256


>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 813

 Score = 32.3 bits (70), Expect = 0.069
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 256 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
           ITI+ A   F      + +ID PGH DF   +    +  D AV I+    G
Sbjct: 79  ITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129



 Score = 28.7 bits (61), Expect = 0.85
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 72  NIVVIGHVDSGKSTTTGHLIYKCG 143
           N+ +I H+D+GK+T T  ++Y  G
Sbjct: 30  NVGIIAHIDAGKTTLTEKMLYYGG 53


>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 646

 Score = 30.7 bits (66), Expect = 0.21
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 274 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
           ++ +    Y + +ID PGH DF   ++   +  +  +L+V A  G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score = 30.3 bits (65), Expect = 0.28
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 298 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 408
           Y + +ID+PGH DF   + + +   D A ++V A  G
Sbjct: 94  YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 29.5 bits (63), Expect = 0.49
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 310 IIDAPGHRDFIKNMITGTSQADCAVLIV 393
           IID PGH  F      GTS  + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 29.1 bits (62), Expect = 0.64
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +1

Query: 241 LSVSRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 393
           +S+    + +A+   +   +    ID PGH DF+  +    + +D  VL+V
Sbjct: 190 MSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240


>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 662

 Score = 29.1 bits (62), Expect = 0.64
 Identities = 19/62 (30%), Positives = 26/62 (41%)
 Frame = -2

Query: 291 SFELPESNIDCDTTHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSNDQWW 112
           S  L   N D  + +    V  +PK I  I++ F  P S  S    C+Y     S+D  W
Sbjct: 12  SSNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSW 71

Query: 111 WT 106
            T
Sbjct: 72  RT 73


>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 579

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +3

Query: 81  VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERESYH 260
           ++  V+S +ST  G        +D  T+E  +    ++ +G  +Y W++ K+  ER  Y 
Sbjct: 460 LVYRVNSAQSTAAG---LGPVSLDSNTLENVD--VGDLVEGHLQYRWLVAKILKERLGYD 514

Query: 261 N 263
           N
Sbjct: 515 N 515


>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 577

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -1

Query: 574 MRILPS*ISSNLGSLYGGSVES 509
           +R++P  I S+LGSL GG+V S
Sbjct: 389 IRLIPMIIGSSLGSLLGGAVIS 410


>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 380

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +1

Query: 256 ITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 348
           + I+I   + E   +++  T+ID PG  DFI N
Sbjct: 71  VEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103


>SPAC31G5.17c |rps1001|rps10-1|40S ribosomal protein
           S10|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 144

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = -2

Query: 681 WNQGILVEGSNMLSPCHPEMGTKATAAGFVANLLDV*GYFLLEFPQIW 538
           ++QG+LV   +   P HPE+G            LD  GY    +   W
Sbjct: 16  FSQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGW 63


>SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 431

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 693 PAIPWNQGILVEGSNM 646
           P   W++G+L+ GSNM
Sbjct: 43  PTFSWHEGMLIPGSNM 58


>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1564

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 566 TSFLNFLKSGLTVWWFSGILLFTPTMSCLTPR 471
           T  LNF ++     +   +LL  PT +CLT +
Sbjct: 445 TRLLNFARARFPFEYSQFVLLLIPTFACLTSK 476


>SPBP22H7.08 |rps1002|rps10-2, rps10B|40S ribosomal protein
           S10|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 147

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = -2

Query: 681 WNQGILVEGSNMLSPCHPEMGTKATAAGFVANLLDV*GYFLLEFPQIW 538
           + QG+LV   +   P HPE+G            LD  GY    +   W
Sbjct: 16  FQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGW 63


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,995,172
Number of Sequences: 5004
Number of extensions: 63498
Number of successful extensions: 232
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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