Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40122
         (708 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065745-1|BAC05965.1|  232|Homo sapiens seven transmembrane hel...    32   2.3  
AB065743-1|BAC05963.1|  222|Homo sapiens seven transmembrane hel...    31   5.3  
AF399506-1|AAK94991.1|  216|Homo sapiens olfactory receptor prot...    30   9.3  
AF162669-1|AAG43387.1|  311|Homo sapiens olfactory receptor-like...    30   9.3  
AF162668-1|AAG43386.1|  311|Homo sapiens olfactory receptor-like...    30   9.3  

>AB065745-1|BAC05965.1|  232|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 232

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 11/43 (25%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +1

Query: 571 GCV-KCYIIFYLIVAEHYFVFRIQYKRVLSICR*IAFYNVLNK 696
           GC+ +CY++  +++AEH  +  + Y R ++IC  + + + +++
Sbjct: 16  GCLMQCYVVIAVVLAEHCMLAVMAYDRYMAICNPLLYSSKMSQ 58


>AB065743-1|BAC05963.1|  222|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 222

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 10/40 (25%), Positives = 24/40 (60%)
 Frame = +1

Query: 577 VKCYIIFYLIVAEHYFVFRIQYKRVLSICR*IAFYNVLNK 696
           V+CY    +++ E+Y +  + Y R ++IC  + + + ++K
Sbjct: 19  VQCYFFIAVVITEYYMLAVMAYDRYVAICNPLLYSSKMSK 58


>AF399506-1|AAK94991.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 577 VKCYIIFYLIVAEHYFVFRIQYKRVLSICR*IAFYNVLNKR 699
           V+ +    L V E Y +  + Y R ++IC+ + + +++N+R
Sbjct: 32  VQLFFFILLGVTEFYLLAAMSYDRYVAICKPLHYLSIMNRR 72


>AF162669-1|AAG43387.1|  311|Homo sapiens olfactory receptor-like
           protein JCG2 protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 574 CV-KCYIIFYLIVAEHYFVFRIQYKRVLSICR*IAFYNVLNKR 699
           C+ + Y     ++AE Y +  ++Y R ++ICR + +  V++ R
Sbjct: 97  CITQLYFFLIFVIAEGYLLTAMEYDRYVAICRPLLYNIVMSHR 139


>AF162668-1|AAG43386.1|  311|Homo sapiens olfactory receptor-like
           protein JCG2 protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 574 CV-KCYIIFYLIVAEHYFVFRIQYKRVLSICR*IAFYNVLNKR 699
           C+ + Y     ++AE Y +  ++Y R ++ICR + +  V++ R
Sbjct: 97  CITQLYFFLIFVIAEGYLLTAMEYDRYVAICRPLLYNIVMSHR 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,142,595
Number of Sequences: 237096
Number of extensions: 1244231
Number of successful extensions: 1997
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1997
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)