Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40121
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p pro...   140   8e-34
AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB...   140   8e-34
AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA...   140   8e-34

>AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p
           protein.
          Length = 148

 Score =  140 bits (340), Expect = 8e-34
 Identities = 66/87 (75%), Positives = 72/87 (82%)
 Frame = +1

Query: 7   EVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKL 186
           +VDE LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+KKL
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKL 63

Query: 187 RRAKKEAPPNEKPEIVKTHLRNISSFP 267
           R+AKKEAPPNEKPEIVKTHLRN+   P
Sbjct: 64  RKAKKEAPPNEKPEIVKTHLRNMIIVP 90



 Score =  126 bits (304), Expect = 2e-29
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = +3

Query: 243 LEKHIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 422
           L   IIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSS
Sbjct: 83  LRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSS 142

Query: 423 RFIPLK 440
           RFIPLK
Sbjct: 143 RFIPLK 148


>AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB,
           isoform B protein.
          Length = 147

 Score =  140 bits (340), Expect = 8e-34
 Identities = 66/87 (75%), Positives = 72/87 (82%)
 Frame = +1

Query: 7   EVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKL 186
           +VDE LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+KKL
Sbjct: 3   QVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKL 62

Query: 187 RRAKKEAPPNEKPEIVKTHLRNISSFP 267
           R+AKKEAPPNEKPEIVKTHLRN+   P
Sbjct: 63  RKAKKEAPPNEKPEIVKTHLRNMIIVP 89



 Score =  126 bits (304), Expect = 2e-29
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = +3

Query: 243 LEKHIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 422
           L   IIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSS
Sbjct: 82  LRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSS 141

Query: 423 RFIPLK 440
           RFIPLK
Sbjct: 142 RFIPLK 147


>AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA,
           isoform A protein.
          Length = 148

 Score =  140 bits (340), Expect = 8e-34
 Identities = 66/87 (75%), Positives = 72/87 (82%)
 Frame = +1

Query: 7   EVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKL 186
           +VDE LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+KKL
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKL 63

Query: 187 RRAKKEAPPNEKPEIVKTHLRNISSFP 267
           R+AKKEAPPNEKPEIVKTHLRN+   P
Sbjct: 64  RKAKKEAPPNEKPEIVKTHLRNMIIVP 90



 Score =  126 bits (304), Expect = 2e-29
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = +3

Query: 243 LEKHIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 422
           L   IIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSS
Sbjct: 83  LRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSS 142

Query: 423 RFIPLK 440
           RFIPLK
Sbjct: 143 RFIPLK 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,423,832
Number of Sequences: 53049
Number of extensions: 408131
Number of successful extensions: 1046
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)