Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40116
         (845 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.061
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 0.061
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +1

Query: 268 FIIALTLAVTSSYKVNNFVLNMVYLIYLVSVYFSKYFNTLFRHKQN*TSKNVLKYVC--- 438
           F   L + +   Y    F+L  V+L+ LV +Y+  Y + LF       + ++L  +C   
Sbjct: 228 FYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287

Query: 439 -YCDFIVLL 462
            YC  I+LL
Sbjct: 288 FYCALIILL 296


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +1

Query: 259 FECFIIALTLAVTSSYKVNNFVLNMVYLIYLVSVYFSKYFNTLFRHKQN*TSKNVLKYVC 438
           F   + +      +S    + V N ++ I  VS+    +  T F        K VLK   
Sbjct: 265 FNTIVFSFCYCYYNSKMTKDGVYNTLFFIVYVSLLLGPH-PTYFGKTGR---KTVLKTNK 320

Query: 439 YCDFIVL 459
           YC+FI+L
Sbjct: 321 YCNFIIL 327


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 332 WCTLFI*YLCIFPNILIRYSDTNKIK 409
           +C++ + +L  F NIL R    N +K
Sbjct: 76  YCSVLLVFLTYFFNILFRKKLLNAVK 101


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 332 WCTLFI*YLCIFPNILIRYSDTNKIK 409
           +C++ + +L  F NIL R    N +K
Sbjct: 72  YCSVLLVFLTYFFNILFRKKLLNAVK 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,099
Number of Sequences: 336
Number of extensions: 3584
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)