Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40116
         (845 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40226-1|AAB01760.1|   76|Drosophila melanogaster L43 protein.         71   3e-12
AY075553-1|AAL68360.1|   56|Drosophila melanogaster RH58777p pro...    71   3e-12
AE013599-3176|AAF46708.1|   76|Drosophila melanogaster CG10071-P...    71   3e-12
AE013599-3175|AAM70864.1|   76|Drosophila melanogaster CG10071-P...    71   3e-12
AE013599-3174|AAM70863.1|   76|Drosophila melanogaster CG10071-P...    71   3e-12

>U40226-1|AAB01760.1|   76|Drosophila melanogaster L43 protein.
          Length = 76

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 32/43 (74%), Positives = 37/43 (86%), Gaps = 2/43 (4%)
 Frame = +2

Query: 32  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLG--VSAIINK 154
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLG  V  +IN+
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQ 43


>AY075553-1|AAL68360.1|   56|Drosophila melanogaster RH58777p
           protein.
          Length = 56

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 32/43 (74%), Positives = 37/43 (86%), Gaps = 2/43 (4%)
 Frame = +2

Query: 32  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLG--VSAIINK 154
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLG  V  +IN+
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQ 43


>AE013599-3176|AAF46708.1|   76|Drosophila melanogaster CG10071-PC,
           isoform C protein.
          Length = 76

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 32/43 (74%), Positives = 37/43 (86%), Gaps = 2/43 (4%)
 Frame = +2

Query: 32  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLG--VSAIINK 154
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLG  V  +IN+
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQ 43


>AE013599-3175|AAM70864.1|   76|Drosophila melanogaster CG10071-PB,
           isoform B protein.
          Length = 76

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 32/43 (74%), Positives = 37/43 (86%), Gaps = 2/43 (4%)
 Frame = +2

Query: 32  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLG--VSAIINK 154
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLG  V  +IN+
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQ 43


>AE013599-3174|AAM70863.1|   76|Drosophila melanogaster CG10071-PA,
           isoform A protein.
          Length = 76

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 32/43 (74%), Positives = 37/43 (86%), Gaps = 2/43 (4%)
 Frame = +2

Query: 32  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLG--VSAIINK 154
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLG  V  +IN+
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQ 43


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,473,848
Number of Sequences: 53049
Number of extensions: 555301
Number of successful extensions: 1381
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)