Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40115
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.56 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   5.2  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   6.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   6.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.1  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 829 NSTFCDSQRLAKKVLETIGNGMRAEAISWVSNSQRKSSYISNS 701
           N  F  S  LAK V    GNG +  + S   + +   S I+N+
Sbjct: 381 NKRFMRSDHLAKHVKTHNGNGKKGSSDSCSDSEENSQSDITNN 423


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 319 NTKPTLPLMCGNSFSRAGLLSSGL 248
           N KP +  +CG S++R   L + L
Sbjct: 246 NQKPNVCRICGKSYARPSTLKTHL 269


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 709 SNSSLELGTEIFWFDVQNFRCKNS 638
           S++ +E  + ++WF V+   CK S
Sbjct: 389 SDAEIEKLSTVYWFTVEFGLCKES 412


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +3

Query: 183 YLATWLQYRAHGKKHNDAQSHQRP 254
           YL  W+  R   + H D    +RP
Sbjct: 15  YLNIWVPQRLRIRHHGDKPPQERP 38


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 711 LATPAWNLARRSSGLMSRISGAKIVPESYTCLTT 610
           L+TP+ + A +SSGL S +S +   P      TT
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTT 162


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 86  NYFVKIIQLLDEYPKCF 136
           N   KI  L+DE+ +CF
Sbjct: 214 NLHNKICNLIDEFNECF 230


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 407 QWGNGTRTSW 378
           Q+GNG  TSW
Sbjct: 274 QFGNGLETSW 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,051
Number of Sequences: 336
Number of extensions: 4698
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)