Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40114
(849 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 42 6e-04
05_05_0149 - 22733703-22736216 32 0.66
01_01_0472 - 3473096-3474288,3474833-3474938 32 0.66
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 31 1.2
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 31 1.5
09_02_0477 - 9737851-9739356 30 2.0
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 29 3.5
08_01_1025 + 10361064-10361237,10361807-10361877,10362001-103622... 29 3.5
01_06_0749 - 31655348-31657339 29 3.5
01_06_0259 + 27955005-27955436,27955685-27955822 29 3.5
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 29 4.7
08_01_0490 + 4284192-4284740 29 6.2
02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744... 29 6.2
01_03_0014 + 11655216-11655287,11657833-11658048,11659848-116619... 29 6.2
06_01_1009 - 7859357-7859405,7860476-7860660,7860747-7860821,786... 28 8.2
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 28 8.2
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 28 8.2
>02_05_0232 +
27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 41.9 bits (94), Expect = 6e-04
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Frame = +1
Query: 337 SNFAQDARTPRSI*KLADYHQGEGREALRRQ----QGSAASPNLRRHRLMDERT*EANTE 504
S+FA + ++ + H+ EAL +Q + + N +L D + E
Sbjct: 407 SHFASKVKELENLYQKEVMHRKITEEALEKQIQETEETERHCNALYDKLHDVEEQKLMVE 466
Query: 505 HHTGSDLASVNILMQKQQMIETQMAVKAKQVTELETQAEYLQKTVPDKMEEIKEKKKTVE 684
H A + + +E Q +++TE++ + K DK+ +++E+K VE
Sbjct: 467 QHITEMEAVLKEREDRLHDVEEQKFTVEQRITEMQA----VLKEHKDKLHDVEEQKLMVE 522
Query: 685 HRFEQLKAPLLERQRHLAKKKEAFQFVAMSRTRSLLVQEK 804
HR ++++ L ER+ LA+ K Q + + + L QE+
Sbjct: 523 HRITEIRSVLKEREEKLAESKYLLQVLQADKEK--LQQER 560
>05_05_0149 - 22733703-22736216
Length = 837
Score = 31.9 bits (69), Expect = 0.66
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 290 QNAAEELMKQKPEFVEVISPKMHELQDQFENLQTTTKEKG--ERLFDANREVLLHQTCDD 463
QN +E+ E E + K+HE + Q +++E E + + QT D
Sbjct: 395 QNIHKEMNAACSELAEFVE-KLHEPEPQNSGFMNSSQESSCQEEDSEVTSQYAKKQTSDS 453
Query: 464 IDSWMNELEKQ 496
ID NE+EKQ
Sbjct: 454 IDGSKNEVEKQ 464
>01_01_0472 - 3473096-3474288,3474833-3474938
Length = 432
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/81 (23%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +1
Query: 550 KQQMIETQMAVKAKQVTELETQAEYLQKTVPD---KMEEIKEKKKTVEHRFEQLKAPLLE 720
+Q++ + + ++++ AE LQ+T+ K+EE+ E+K VE++F+QL+ E
Sbjct: 304 RQELADASEKLLQEKLSNSSVTAE-LQETIESIRIKLEEVSEEKLLVENKFKQLEEANSE 362
Query: 721 RQRHLAKKKEAFQFVAMSRTR 783
+++ + A + ++ + R
Sbjct: 363 AEKYNQELSHATEKLSEEKFR 383
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +1
Query: 502 EHHTGSDLASVNILMQKQQMIETQMAVKAKQVTELETQAEYLQKTVPD--KMEEIKEKKK 675
E ++ L ++IL +++++ ++V +L T+ LQ T+ EE++E +
Sbjct: 815 EENSRKLLMEMSILKNEKEILAKSEKKALEEVHDLTTRVHRLQATIDTIHATEEVQENAR 874
Query: 676 TVEHRFEQLKAPLLERQRHLAKKK 747
++E R ++ LER KK+
Sbjct: 875 SIERRNQEEYIKRLERDWAEVKKE 898
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 490 EANTEHHTGSDLASVNILMQKQQMIETQMAVKAKQVTELETQAEYLQKTVPDKMEEIKEK 669
+ T HT + + V + K Q +M + + VT ++ + E +K V + +E+ +EK
Sbjct: 929 DIETIGHTDLEKSKV-AEVSKLQAALNEMEQRMQDVTAMQ-ERESAKKAVEEALEQEREK 986
Query: 670 KKTVEHRFEQLKAPLLERQRH--LAKKKEA 753
++ E LKA L+ Q L KK A
Sbjct: 987 ISSLTSEIEGLKALLVAEQEENDLTKKAHA 1016
>09_02_0477 - 9737851-9739356
Length = 501
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +2
Query: 287 VQNAAEELMKQKPEFVEVISPKMHELQDQFENLQTTTKEKGERLFD--ANREVLLHQTCD 460
++ A+ L + + +F+ V+SPK +L FE K KG + D ++L H++
Sbjct: 326 LKEVAKGLERAEVDFIWVVSPKDIDLGPGFEE---RVKGKGIVVRDWVDQSQILQHKSVR 382
Query: 461 DIDS---WMNELEKQIQSTIPVAIWP 529
S W + LE + + +P+A+WP
Sbjct: 383 GFLSHCGWNSVLES-VTAGVPLAVWP 407
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 29.5 bits (63), Expect = 3.5
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 21/121 (17%)
Frame = +1
Query: 502 EHHTGSDLASVNILMQ----KQQMIETQMAVKAKQVTELETQAEY---LQKTVPD----- 645
E H G L ++ M+ QM+++QM K + E E EY Q+T+ D
Sbjct: 1434 EKHNGDVLCKLSKEMECVVYTMQMLQSQM---VKLLQEKENAKEYHFQSQRTIKDVSAKV 1490
Query: 646 --KMEEIKEKKKTVEHRFEQLKAPLLERQRHLA-------KKKEAFQFVAMSRTRSLLVQ 798
EI +K+K E R ++L+ + E+++ A K++EA + + +S +SL +Q
Sbjct: 1491 LQLKSEIIDKEKGYEARLKELEIKMQEKEKDTAESFISWNKEREALE-LEVSEAKSLAIQ 1549
Query: 799 E 801
+
Sbjct: 1550 K 1550
>08_01_1025 +
10361064-10361237,10361807-10361877,10362001-10362235,
10362317-10362520
Length = 227
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 89 PHGEAPRPASVAPVLAGLRRTWRMGSGEERYRTR-RYLPLRQDH 217
P AP P+ + P G R +G GEE YR R +Y L QD+
Sbjct: 11 PAARAP-PSPLLPRAPGHSRGGGVGGGEEAYRARAKYKNLLQDY 53
>01_06_0749 - 31655348-31657339
Length = 663
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 413 RLFDANREVLLHQTCDDIDSW 475
R++D +++LLHQ C+D SW
Sbjct: 419 RMYDEAKKLLLHQGCNDTVSW 439
>01_06_0259 + 27955005-27955436,27955685-27955822
Length = 189
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 107 RPASVAPVLAGLRRTWRMGSGEERYRTRRYLPLRQD 214
RP PV++ +RTW+ SGE + Y R D
Sbjct: 92 RPCRTQPVISYTQRTWKAASGEPMHAESGYWRPRPD 127
>04_04_0751 -
27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 690 IRTTQGAITRTPTSPCQEEGSLPVRRDVEDQKLVGPGEDAFWPQAP 827
I T A TR + C G LPV D ++ L+G G + W P
Sbjct: 184 IHATLRACTRN-RAMCSSSGLLPVLLDSAEKLLIGMGRASSWDGTP 228
>08_01_0490 + 4284192-4284740
Length = 182
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 26 DSAQGGEHRGTPQCQPRKGT*PHGEAPRPASVAPVLAGLRRTWRMGSGEE 175
+ G H PQ +PR G GE PAS +LA T G+G +
Sbjct: 72 EQGSGPHHNAVPQWKPRGG----GELRLPASPPVILAAAGTTPERGNGSK 117
>02_05_0958 +
33073302-33073442,33073839-33073913,33074382-33074497,
33076863-33076977,33077100-33077228,33078907-33078954,
33079343-33079469,33079634-33079789,33080031-33080287,
33080431-33080580,33080660-33080714,33080793-33081088,
33081252-33081335,33081869-33081941,33082164-33082291,
33082905-33083090,33083179-33083316,33083394-33083519,
33083705-33083965
Length = 886
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 538 ILMQKQQMIETQMAVKAKQVTELETQAEYLQKTVPDKMEEIK 663
+L+ KQQ + M+V KQV++L+ L+ + KM+ ++
Sbjct: 831 LLIGKQQKLSVCMSVHQKQVSDLQKDHRQLEMSTVKKMKMVQ 872
>01_03_0014 +
11655216-11655287,11657833-11658048,11659848-11661912,
11662966-11663013,11663081-11663328,11663429-11663558,
11663707-11663983,11664102-11664180,11664311-11664397,
11664586-11664618
Length = 1084
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 394 GSLQVFKLILEFVHLGRNYFNEFRFLLHE-LFSGIL 290
G+L +FK E H+ RNY FR HE L++G+L
Sbjct: 457 GNLNIFKQE-EIKHMTRNYSMTFREEFHERLYNGVL 491
>06_01_1009 -
7859357-7859405,7860476-7860660,7860747-7860821,
7860852-7861313,7861411-7861482,7861629-7861775,
7861888-7862043,7862136-7862306,7862505-7862675,
7862763-7862828,7864302-7864387,7864505-7864667
Length = 600
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +2
Query: 359 ELQDQFENLQTTTKEKGERLFDANREVLLHQT----CDDIDSWMNELEKQIQ 502
+LQD L TK+K L DA R V + DD+ + EL KQI+
Sbjct: 165 KLQDDNRALDRLTKQKEAALLDAERTVEIAMAKAAMVDDLQNKNQELMKQIE 216
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +1
Query: 541 LMQKQQMIETQMAVKAKQVTELETQAEYLQKTVPDKMEEIKEKKKTVEHRFEQLKAPLLE 720
L+Q QQ+ E + ++ + ++Q L++ EE++EK ++E + E+ ++ L +
Sbjct: 837 LLQVQQL-EANLKNLESELEQKQSQVSALEQA----NEELREKISSLERQLEEARSKLQD 891
Query: 721 RQRHLAKKKE-AFQFVAMSRTRSLLVQEKMPSGHKH 825
L +KE A + S T +E++ +H
Sbjct: 892 EIIKLQGEKERALDNLQQSNTSIKTFEEELEKQREH 927
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 28.3 bits (60), Expect = 8.2
Identities = 30/143 (20%), Positives = 64/143 (44%)
Frame = +1
Query: 379 KLADYHQGEGREALRRQQGSAASPNLRRHRLMDERT*EANTEHHTGSDLASVNILMQKQQ 558
+L + + E E L++Q A ++ L E T EA E ++N +++Q
Sbjct: 664 QLVEKEKIEAEELLQKQIKEIAKRGGKKPVLQGEVTKEAVME-------LAMNEQFKERQ 716
Query: 559 MIETQMAVKAKQVTELETQAEYLQKTVPDKMEEIKEKKKTVEHRFEQLKAPLLERQRHLA 738
+E ++ KQ+ LE + + ++ + + + + + H EQL+ L +Q H
Sbjct: 717 EMEKKLQKTGKQMDYLERAKRQEEAPLIEQAFQKRLEVEKILHEQEQLREIELSKQHHAG 776
Query: 739 KKKEAFQFVAMSRTRSLLVQEKM 807
+E + M +++ QE++
Sbjct: 777 DLQEKNRLSRMLEHKNIF-QERI 798
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,155,655
Number of Sequences: 37544
Number of extensions: 429118
Number of successful extensions: 1880
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1879
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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