Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40109
         (825 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   1.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   1.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   1.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   3.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.0  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 208 SAETSVCSDNGIIIAGDGYNTTSV 137
           +AE   CS   I + GDGY   S+
Sbjct: 449 NAENGSCSGKTITVGGDGYADISL 472


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 208 SAETSVCSDNGIIIAGDGYNTTSV 137
           +AE   CS   I + GDGY   S+
Sbjct: 450 NAENGSCSGKTITVGGDGYADISL 473


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 208 SAETSVCSDNGIIIAGDGYNTTSV 137
           +AE   CS   I + GDGY   S+
Sbjct: 450 NAENGSCSGKTITVGGDGYADISL 473


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 400 LYYKRFFPYYVSNVL 444
           +++KRF P YVS +L
Sbjct: 168 VFFKRFLPVYVSYLL 182


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 276 RSQYCTLNNLNSFFWS 229
           +S YC     N FFWS
Sbjct: 112 KSHYCLFVASNCFFWS 127


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 276 RSQYCTLNNLNSFFWS 229
           +S YC     N FFWS
Sbjct: 112 KSHYCLFVASNCFFWS 127


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 386 ICATAGVVIDLLCSC 342
           IC T GV+I + C C
Sbjct: 42  ICYTIGVIITIGCLC 56


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +3

Query: 93  LCLVRNSIVSSPTRTTEVVL*PSPAMIMP 179
           LC+V NS+      T   V  P  A I P
Sbjct: 306 LCVVNNSVGGESVETVLTVTAPLKAKIEP 334


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 307 SRLMCHTSSQSLPILYS 257
           SR+M H +S   PILY+
Sbjct: 338 SRIMFHINSAVNPILYN 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,873
Number of Sequences: 336
Number of extensions: 4428
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)